Zobrazeno 1 - 10
of 50
pro vyhledávání: '"Katherine B. Louie"'
Autor:
Yang Tian, Yu Gao, Halbay Turumtay, Emine Akyuz Turumtay, Yen Ning Chai, Hemant Choudhary, Joon-Hyun Park, Chuan-Yin Wu, Christopher M. De Ben, Jutta Dalton, Katherine B. Louie, Thomas Harwood, Dylan Chin, Khanh M. Vuu, Benjamin P. Bowen, Patrick M. Shih, Edward E. K. Baidoo, Trent R. Northen, Blake A. Simmons, Robert Hutmacher, Jackie Atim, Daniel H. Putnam, Corinne D. Scown, Jenny C. Mortimer, Henrik V. Scheller, Aymerick Eudes
Publikováno v:
Biotechnology for Biofuels and Bioproducts, Vol 17, Iss 1, Pp 1-16 (2024)
Abstract Background Lignin is an aromatic polymer deposited in secondary cell walls of higher plants to provide strength, rigidity, and hydrophobicity to vascular tissues. Due to its interconnections with cell wall polysaccharides, lignin plays impor
Externí odkaz:
https://doaj.org/article/0ca54f0577224f1fabb4d3ef015fb5ed
Autor:
Mária Džunková, James J. La Clair, Tomáš Tyml, Devin Doud, Frederik Schulz, Samuel Piquer-Esteban, Dafne Porcel Sanchis, Andrew Osborn, David Robinson, Katherine B. Louie, Ben P. Bowen, Robert M. Bowers, Janey Lee, Vicente Arnau, Wladimiro Díaz-Villanueva, Ramunas Stepanauskas, Terrence Gosliner, Shailesh V. Date, Trent R. Northen, Jan-Fang Cheng, Michael D. Burkart, Tanja Woyke
Publikováno v:
Microbiome, Vol 11, Iss 1, Pp 1-24 (2023)
Abstract Background Nudibranchs comprise a group of > 6000 marine soft-bodied mollusk species known to use secondary metabolites (natural products) for chemical defense. The full diversity of these metabolites and whether symbiotic microbes are respo
Externí odkaz:
https://doaj.org/article/d885a6b36ed6498aa727710bc46feac4
Autor:
Dariia Vyshenska, Pranav Sampara, Kanwar Singh, Andy Tomatsu, W. Berkeley Kauffman, Erin E. Nuccio, Steven J. Blazewicz, Jennifer Pett-Ridge, Katherine B. Louie, Neha Varghese, Matthew Kellom, Alicia Clum, Robert Riley, Simon Roux, Emiley A. Eloe-Fadrosh, Ryan M. Ziels, Rex R. Malmstrom
Publikováno v:
mSystems, Vol 8, Iss 4 (2023)
ABSTRACT Stable isotope probing (SIP) facilitates culture-independent identification of active microbial populations within complex ecosystems through isotopic enrichment of nucleic acids. Many DNA-SIP studies rely on 16S rRNA gene sequences to ident
Externí odkaz:
https://doaj.org/article/89714e1557644055a52c06f7ca084abc
Autor:
Daniel G. C. Treen, Mingxun Wang, Shipei Xing, Katherine B. Louie, Tao Huan, Pieter C. Dorrestein, Trent R. Northen, Benjamin P. Bowen
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-10 (2022)
Interrelating metabolites by their fragmentation spectra is central to metabolomics. Here the authors align fragmentation spectra with both statistical significance and allowance for multiple chemical differences using Significant Interrelation of MS
Externí odkaz:
https://doaj.org/article/28bb7180c9054fd7b3d15e5a10010607
Autor:
Sara Calhoun, Tisza Ann Szeremy Bell, Lukas R. Dahlin, Yuliya Kunde, Kurt LaButti, Katherine B. Louie, Andrea Kuftin, Daniel Treen, David Dilworth, Sirma Mihaltcheva, Christopher Daum, Benjamin P. Bowen, Trent R. Northen, Michael T. Guarnieri, Shawn R. Starkenburg, Igor V. Grigoriev
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-15 (2021)
Sara Calhoun, Tisza Ann Szeremy Bell, Lukas Dahlin and colleagues characterize the growth and biomass accumulation of a halotolerant microalga Scenedesmus sp. NREL 46B-D3. They sequenced the genome and profiled the transcriptomic and metabolomic resp
Externí odkaz:
https://doaj.org/article/9c63e3da0b6346f6bef149201df4347e
Autor:
Katherine M. Murphy, Joseph Edwards, Katherine B. Louie, Benjamin P. Bowen, Venkatesan Sundaresan, Trent R. Northen, Philipp Zerbe
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-13 (2021)
Abstract Plants deploy both primary and species-specific, specialized metabolites to communicate with other organisms and adapt to environmental challenges, including interactions with soil-dwelling microbial communities. However, the role of special
Externí odkaz:
https://doaj.org/article/1c1dd7d553454d948130e0814ea46603
Autor:
Candice L. Swift, Katherine B. Louie, Benjamin P. Bowen, Casey A. Hooker, Kevin V. Solomon, Vasanth Singan, Chris Daum, Christa P. Pennacchio, Kerrie Barry, Vaithiyalingam Shutthanandan, James E. Evans, Igor V. Grigoriev, Trent R. Northen, Michelle A. O’Malley
Publikováno v:
mBio, Vol 12, Iss 4 (2021)
ABSTRACT Anaerobic gut fungi (Neocallimastigomycetes) live in the digestive tract of large herbivores, where they are vastly outnumbered by bacteria. It has been suggested that anaerobic fungi challenge growth of bacteria owing to the wealth of biosy
Externí odkaz:
https://doaj.org/article/839aff9d79a84a08aa87d725f0873150
Autor:
Scott C. Thomas, Devon Payne, Kevin O. Tamadonfar, Cale O. Seymour, Jian-Yu Jiao, Senthil K. Murugapiran, Dengxun Lai, Rebecca Lau, Benjamin P. Bowen, Leslie P. Silva, Katherine B. Louie, Marcel Huntemann, Alicia Clum, Alex Spunde, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, I-Min Chen, Dimitrios Stamatis, T. B. K. Reddy, Ronan O’Malley, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos C. Kyrpides, Tanja Woyke, Emiley Eloe-Fadrosh, Trinity L. Hamilton, Paul Dijkstra, Jeremy A. Dodsworth, Trent R. Northen, Wen-Jun Li, Brian P. Hedlund
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
Thermoflexus hugenholtzii JAD2T, the only cultured representative of the Chloroflexota order Thermoflexales, is abundant in Great Boiling Spring (GBS), NV, United States, and close relatives inhabit geothermal systems globally. However, no defined me
Externí odkaz:
https://doaj.org/article/7a1c8e29af404cba92120c46c9f785a5
Autor:
Marc G. Chevrette, Camila Carlos-Shanley, Katherine B. Louie, Benjamin P. Bowen, Trent R. Northen, Cameron R. Currie
Publikováno v:
Frontiers in Microbiology, Vol 10 (2019)
The advent of culture independent approaches has greatly facilitated insights into the vast diversity of bacteria and the ecological importance they hold in nature and human health. Recently, metagenomic surveys and other culture-independent methods
Externí odkaz:
https://doaj.org/article/455713f8ef164b98915074059a5cff05
Autor:
Manuel Porcar, Katherine B. Louie, Suzanne M. Kosina, Marc W. Van Goethem, Benjamin P. Bowen, Kristie Tanner, Trent R. Northen
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
Solar panels can be found practically all over the world and represent a standard surface that can be colonized by microbial communities that are resistant to harsh environmental conditions, including high irradiation, temperature fluctuations and de
Externí odkaz:
https://doaj.org/article/b2f0868ae4714a26b5f632be3b727731