Zobrazeno 1 - 10
of 33
pro vyhledávání: '"Katarzyna J. Purzycka"'
Publikováno v:
Viruses, Vol 9, Iss 4, p 74 (2017)
The long-terminal repeat retrotransposon Ty1 is the most abundant mobile genetic element in many Saccharomyces cerevisiae isolates. Ty1 retrotransposons contribute to the genetic diversity of host cells, but they can also act as an insertional mutage
Externí odkaz:
https://doaj.org/article/f5ba8f9301ce4dc9b738e4b78d018df9
Publikováno v:
Viruses, Vol 8, Iss 7, p 193 (2016)
Long-terminal repeat (LTR) retrotransposons are transposable genetic elements that replicate intracellularly, and can be considered progenitors of retroviruses. Ty1 and Ty3 are the most extensively characterized LTR retrotransposons whose RNA genomes
Externí odkaz:
https://doaj.org/article/01bec62124574155a04fe37a94ec94bf
Publikováno v:
Nucleic Acids Research. 50:10717-10732
The ribosomal core is universally conserved across the tree of life. However, eukaryotic ribosomes contain diverse rRNA expansion segments (ESs) on their surfaces. Sites of ES insertions are predicted from sites of insertion of micro-ESs in archaea.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bc63f7e1494daa9cfd0aedb9810503b1
https://doi.org/10.1093/nar/gkac844
https://doi.org/10.1093/nar/gkac844
Autor:
Katarzyna Lepeta, Katarzyna J Purzycka, Katarzyna Pachulska‐Wieczorek, Marina Mitjans, Martin Begemann, Behnam Vafadari, Krystian Bijata, Ryszard W Adamiak, Hannelore Ehrenreich, Magdalena Dziembowska, Leszek Kaczmarek
Publikováno v:
EMBO Molecular Medicine, Vol 9, Iss 8, Pp 1100-1116 (2017)
Abstract Matrix metalloproteinase 9 (MMP‐9) has recently emerged as a molecule that contributes to pathological synaptic plasticity in schizophrenia, but explanation of the underlying mechanisms has been missing. In the present study, we performed
Externí odkaz:
https://doaj.org/article/feb3d99d19e44a4dbaf612ffffbb7a49
Autor:
Katarzyna Pachulska-Wieczorek, Hyo Won Ahn, David J. Garfinkel, Julita Gumna, Katarzyna J. Purzycka
Publikováno v:
RNA Biology
During replication of long terminal repeat (LTR)-retrotransposons, their proteins and genome (g) RNA assemble into virus-like particles (VLPs) that are not infectious but functionally related to retroviral virions. Both virions and VLPs contain gRNA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1221d516dc292edaa6f62de48afa369d
http://europepmc.org/articles/PMC6844567
http://europepmc.org/articles/PMC6844567
Publikováno v:
Methods. 103:120-127
RNAs adopt specific, stable tertiary architectures to perform their activities. Knowledge of RNA tertiary structure is fundamental to understand RNA functions beginning with transcription and ending with turnover. Contrary to advanced RNA secondary s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6fdac976c2b71ba6fd702cc4f236d6c8
https://doi.org/10.1016/j.ymeth.2016.03.010
https://doi.org/10.1016/j.ymeth.2016.03.010
Autor:
Leszek Błaszczyk, Julita Gumna, Katarzyna J. Purzycka, Katarzyna Pachulska-Wieczorek, Yuri Nishida, David J. Garfinkel, Agniva Saha
Publikováno v:
Nucleic Acids Research
Ty1 Gag comprises the capsid of virus-like particles and provides nucleic acid chaperone (NAC) functions during retrotransposition in budding yeast. A subgenomic Ty1 mRNA encodes a truncated Gag protein (p22) that is cleaved by Ty1 protease to form p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::672a41009282d34eab8762e8860c9a2a
https://doi.org/10.1093/nar/gkv695
https://doi.org/10.1093/nar/gkv695
Autor:
Lizzette M. Gómez Ramos, Dev P. Arya, Katarzyna J. Purzycka, Natalya N. Degtyareva, Loren Dean Williams, Michael Y. Hu, Liuwei Jiang, Anton S. Petrov, Stefany Y. Holguin, Nicholas A. Kovacs, Marcin Biesiada
Publikováno v:
Biochemistry. 56(40)
Diversity in eukaryotic rRNA structure and function offers possibilities of therapeutic targets. Unlike ribosomes of prokaryotes, eukaryotic ribosomes contain species-specific rRNA expansion segments (ESs) with idiosyncratic structures and functions
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f82da05b7272604288574e38e987d399
https://pubmed.ncbi.nlm.nih.gov/28895721
https://pubmed.ncbi.nlm.nih.gov/28895721
Autor:
Hannelore Ehrenreich, Behnam Vafadari, Katarzyna Lepeta, Katarzyna Pachulska-Wieczorek, Leszek Kaczmarek, Martin Begemann, Krystian Bijata, Magdalena Dziembowska, Katarzyna J. Purzycka, Ryszard W. Adamiak, Marina Mitjans
Publikováno v:
EMBO Molecular Medicine
Matrix metalloproteinase 9 (MMP‐9) has recently emerged as a molecule that contributes to pathological synaptic plasticity in schizophrenia, but explanation of the underlying mechanisms has been missing. In the present study, we performed a phenoty
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::81d3e04d0ccceff1962496d932e98d8f
https://hdl.handle.net/11858/00-001M-0000-002D-C4A5-C11858/00-001M-0000-002D-C4A3-0
https://hdl.handle.net/11858/00-001M-0000-002D-C4A5-C11858/00-001M-0000-002D-C4A3-0
Autor:
Greggory M. Rice, Dong Zhang, Yi Xiao, François Major, Joseph A. Piccirilli, Thomas H. Mann, Fang-Chieh Chou, Marcin Biesiada, Clarence Yu Cheng, Feng Ding, Arpit Tandon, Dinshaw J. Patel, Kevin M. Weeks, Alexander J. Becka, Joanna Sarzynska, John SantaLucia, Ryszard W. Adamiak, Kalli Kappel, Rhiju Das, Wipapat Kladwang, Zhichao Miao, Michal J. Boniecki, Robert T. Batey, Katarzyna J. Purzycka, Tomasz Zok, Caleb Geniesse, Aiming Ren, Wayne K. Dawson, Maciej Antczak, Janusz M. Bujnicki, Shi-Jie Chen, Andrey Krokhotin, Jian Wang, Katarzyna Pachulska-Wieczorek, Siqi Tian, Nikolay V. Dokholyan, Xiaojun Xu, Marcin Magnus, Grzegorz Łach, Marta Szachniuk, Stanislaw Dunin-Horkawicz, Jeremiah J. Trausch, Eric Westhof, Benfeard Williams, Mariusz Popenda, Adrian R. Ferré-D'Amaré
Publikováno v:
RNA
RNA, Cold Spring Harbor Laboratory Press, 2017, 23 (5), pp.655-672. ⟨10.1261/rna.060368.116⟩
RNA, Cold Spring Harbor Laboratory Press, 2017, 23 (5), pp.655-672. ⟨10.1261/rna.060368.116⟩
RNA-Puzzles is a collective experiment in blind 3D RNA structure prediction. We report here a third round of RNA-Puzzles. Five puzzles, 4, 8, 12, 13, 14, all structures of riboswitch aptamers and puzzle 7, a ribozyme structure, are included in this r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c02529620f2174f01acae09e88a752f7
https://hal.archives-ouvertes.fr/hal-02171291
https://hal.archives-ouvertes.fr/hal-02171291