Zobrazeno 1 - 10
of 28
pro vyhledávání: '"Kapinos, Andrew"'
Autor:
Kapinos, Andrew1 (AUTHOR), Aghamalian, Pauline1 (AUTHOR), Capehart, Erika1 (AUTHOR), Alag, Anya1 (AUTHOR), Angel, Heather1 (AUTHOR), Briseno, Eddie1 (AUTHOR), Corado Perez, Byron1 (AUTHOR), Farag, Emily1 (AUTHOR), Foster, Hilory1 (AUTHOR), Hakim, Abbas1 (AUTHOR), Hernandez-Casas, Daisy1 (AUTHOR), Huang, Calvin1 (AUTHOR), Lam, Derek1 (AUTHOR), Mendez, Maya1 (AUTHOR), Min, Ashley1 (AUTHOR), Nguyen, Nikki1 (AUTHOR), Omholt, Alexa L.1 (AUTHOR), Ortiz, Emily1 (AUTHOR), Saldivar, Lizbeth Shelly1 (AUTHOR), Shannon, Jack Arthur1 (AUTHOR)
Publikováno v:
PLoS ONE. 1/13/2022, Vol. 17 Issue 1, p1-19. 19p.
Akademický článek
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Autor:
Demo, Stephanie1 (AUTHOR), Kapinos, Andrew1 (AUTHOR), Bernardino, Aaron1 (AUTHOR), Guardino, Kristina1 (AUTHOR), Hobbs, Blake1 (AUTHOR), Hoh, Kimberly1 (AUTHOR), Lee, Edward1 (AUTHOR), Vuong, Iphen1 (AUTHOR), Reddi, Krisanavane1 (AUTHOR), Freise, Amanda C.1 (AUTHOR), Moberg Parker, Jordan1 (AUTHOR) jmobergparker@ucla.edu
Publikováno v:
PLoS ONE. 3/12/2021, Vol. 16 Issue 3, p1-12. 12p.
A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform comparative genomic analyses on phages.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::19a1151f5361322e0093c10e2599471d
Autor:
Liu, Christopher, Chen, Pei Ying, Dang, Preston, Zhang, Michael, Kapinos, Andrew, Ngo, Ryan, Parker, Jordan Moberg, Freise, Amanda C.
Bacteriophages that infect Arthrobacter , a genus of bacteria which play key ecological roles in soil, warrant further study. A novel Actinobacteriophage, Giantsbane, was isolated on Arthrobacter globiformis and purified. Particle stability was teste
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=sharebioRxiv::f14e97f6ba3225c2cccb7870c2b20e81
Autor:
Fett, Sarah, Mujtahid Rahman, Tse, Vincent, Vargas, Aida, Kapinos, Andrew, Canela Torres, Krisanavane Reddi, Parker, Jordan Moberg, Freise, Amanda
Arthrobacter globiformis phage Whytu was isolated from a California soil sample; sequencing revealed one of the smallest Actinobacteriophage genomes. Using comparative genomics, we compared Whytu to other Actinobacteriophages that infect different ho
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::563371cf94232ea6a3e40b84fb010e1a
In this activity, students are introduced to dotplots as a tool for analyzing phage genomic similarity.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3a8c338b1c9f44adbbc5f792bbea3ccb
Autor:
Chen, Pei Ying, Dang, Preston, Liu, Christopher, Zhang, Michael, Ngo, Ryan, Kapinos, Andrew, Freise, Amanda
Arthrobacter bacteria are ubiquitous in soil and play a key role in ecological health. Phages that infect Arthrobacter have the potential to influence soil ecology and thus, need to be physically and genetically characterized to elucidate their ecolo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0eb08f2622c941cb277ffd22db9f204b
Autor:
Choe, Esther, Corado-Perez, Byron, Farag, Emily, Smith, Rachel, Kapinos, Andrew, Canela Torres, Freise, Amanda
Bacteriophages are highly understudied considering their abundance but have significant impacts on ecosystems like the soil microbiome, which is becoming increasingly important in efforts to improve agricultural techniques. In this study, the effort
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3affefea9b8623ca6e6d0275a032656c
Autor:
Bernardino, Aaron, Demo, Stephanie, Lee, Edward, Kapinos, Andrew, Krisanavane Reddi, Parker, Jordan Moberg, Freise, Amanda
With the advent of rapid whole genome sequencing, phages were discovered to be highly diverse genetically and to exhibit genome mosaicism, as a result of horizontal gene transfer. Consequently, a clustering system was created as previous classificati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::20f27bd7e0cf7f726b26d091022916cc