Heterologous production of the widely used natural food colorant carminic acid in Aspergillus nidulans.

Autor: Frandsen RJN; Section for Synthetic Biology, Department of Biotechnology and Biomedicine, The Technical University of Denmark, Kongens Lyngby, Denmark. rasf@bio.dtu.dk., Khorsand-Jamal P; Section for Synthetic Biology, Department of Biotechnology and Biomedicine, The Technical University of Denmark, Kongens Lyngby, Denmark.; Chr. Hansen Natural Colors A/S, Hoersholm, Denmark.; Novo Nordisk A/S, Maaloev, Denmark., Kongstad KT; Department of Drug Design and Pharmacology, University of Copenhagen, Copenhagen, Denmark. kenneth.kongstad@sund.ku.dk., Nafisi M; Chr. Hansen Natural Colors A/S, Hoersholm, Denmark.; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, Denmark., Kannangara RM; Chr. Hansen Natural Colors A/S, Hoersholm, Denmark.; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, Denmark.; River Stone Biotech ApS, København Ø, Fruebjergvej 3, 2100, Denmark., Staerk D; Department of Drug Design and Pharmacology, University of Copenhagen, Copenhagen, Denmark., Okkels FT; Chr. Hansen Natural Colors A/S, Hoersholm, Denmark.; Actabio ApS, Roskilde, Denmark., Binderup K; Chr. Hansen Natural Colors A/S, Hoersholm, Denmark.; DSM Nutritional Products, Kaiseraugst, Switzerland., Madsen B; Chr. Hansen Natural Colors A/S, Hoersholm, Denmark., Møller BL; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, Denmark.; Center for Synthetic Biology, University of Copenhagen, Frederiksberg, Denmark., Thrane U; Section for Synthetic Biology, Department of Biotechnology and Biomedicine, The Technical University of Denmark, Kongens Lyngby, Denmark.; Department of Energy Performance, Indoor Environment and Sustainability, Danish Building Research Institute, Aalborg University Copenhagen, Copenhagen, Denmark., Mortensen UH; Section for Synthetic Biology, Department of Biotechnology and Biomedicine, The Technical University of Denmark, Kongens Lyngby, Denmark.

Publikováno v: Scientific reports [Sci Rep] 2018 Aug 27; Vol. 8 (1), pp. 12853. Date of Electronic Publication: 2018 Aug 27.

From metabolome to phenotype: GC-MS metabolomics of developing mutant barley seeds reveals effects of growth, temperature and genotype.

Autor: Khakimov B; Department of Food Science, University of Copenhagen, Rolighedsvej 26, Frederiksberg, DK-1958, Denmark. bzo@food.ku.dk.; Department of Plant and Environmental Sciences, Copenhagen Plant Science Center, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg, DK-1871, Denmark. bzo@food.ku.dk., Rasmussen MA; Department of Food Science, University of Copenhagen, Rolighedsvej 26, Frederiksberg, DK-1958, Denmark.; Copenhagen Prospective Studies on Asthma in Childhood, Faculty of Health and Medical Sciences, University of Copenhagen & Danish Pediatric Asthma Center, Gentofte Hospital, Copenhagen, Denmark., Kannangara RM; Department of Plant and Environmental Sciences, Copenhagen Plant Science Center, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg, DK-1871, Denmark., Jespersen BM; Department of Food Science, University of Copenhagen, Rolighedsvej 26, Frederiksberg, DK-1958, Denmark., Munck L; Department of Food Science, University of Copenhagen, Rolighedsvej 26, Frederiksberg, DK-1958, Denmark., Engelsen SB; Department of Food Science, University of Copenhagen, Rolighedsvej 26, Frederiksberg, DK-1958, Denmark. se@food.ku.dk.

Publikováno v: Scientific reports [Sci Rep] 2017 Aug 15; Vol. 7 (1), pp. 8195. Date of Electronic Publication: 2017 Aug 15.

Cassava genome from a wild ancestor to cultivated varieties.

Autor: Wang W; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Feng B; 1] Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China [2] Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Xiao J; Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), Beijing 100101, China., Xia Z; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhou X; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Li P; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhang W; 1] Department of Computer Science and Engineering and Department of Genetics, Washington University, Saint Louis, Missouri 63130, USA [2] Institute for Systems Biology, Jianghan University, Wuhan 430056, China., Wang Y; South China Botanical Garden, CAS, Guangzhou 510650, China., Møller BL; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen 1165, Denmark., Zhang P; Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences of CAS, Shanghai 200032, China., Luo MC; Department of Plant Sciences, University of California, Davis, California 95616, USA., Xiao G; South China Botanical Garden, CAS, Guangzhou 510650, China., Liu J; Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), Beijing 100101, China., Yang J; Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences of CAS, Shanghai 200032, China., Chen S; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Rabinowicz PD; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA., Chen X; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhang HB; Department of Soil and Crop Sciences, Texas A&M University, College Station, Texas 77843, USA., Ceballos H; International Center for Tropical Agriculture (CIAT), Cali 6713, Colombia., Lou Q; State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China., Zou M; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Carvalho LJ; Brazilian Enterprise for Agricultural Research (EMBRAPA), Genetic Resources and Biotechnology, Brasilia 70770, Brazil., Zeng C; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Xia J; 1] Department of Computer Science and Engineering and Department of Genetics, Washington University, Saint Louis, Missouri 63130, USA [2] Institute for Systems Biology, Jianghan University, Wuhan 430056, China., Sun S; Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), Beijing 100101, China., Fu Y; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Wang H; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Lu C; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Ruan M; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhou S; Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, Shanghai 200433, China., Wu Z; Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, Shanghai 200433, China., Liu H; Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, Shanghai 200433, China., Kannangara RM; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen 1165, Denmark., Jørgensen K; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen 1165, Denmark., Neale RL; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen 1165, Denmark., Bonde M; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen 1165, Denmark., Heinz N; Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen 1165, Denmark., Zhu W; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Wang S; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhang Y; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Pan K; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Wen M; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Ma PA; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Li Z; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Hu M; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Liao W; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Hu W; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhang S; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Pei J; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Guo A; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Guo J; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhang J; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Zhang Z; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Ye J; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Ou W; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Ma Y; Department of Plant Sciences, University of California, Davis, California 95616, USA., Liu X; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA., Tallon LJ; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA., Galens K; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA., Ott S; Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA., Huang J; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Xue J; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., An F; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Yao Q; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Lu X; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Fregene M; International Center for Tropical Agriculture (CIAT), Cali 6713, Colombia., López-Lavalle LA; International Center for Tropical Agriculture (CIAT), Cali 6713, Colombia., Wu J; Department of Plant Sciences, University of California, Davis, California 95616, USA., You FM; Department of Plant Sciences, University of California, Davis, California 95616, USA., Chen M; Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), Beijing 100101, China., Hu S; Beijing Institute of Genomics, Chinese Academy of Sciences (CAS), Beijing 100101, China., Wu G; South China Botanical Garden, CAS, Guangzhou 510650, China., Zhong S; State Key Laboratory of Agrobiotechnology, School of Life Sciences, Chinese University of Hong Kong, Hong Kong, China., Ling P; Citrus Research and Education Center (CREC), University of Florida, Gainesville, Florida 32611, USA., Chen Y; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Wang Q; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China., Liu G; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Liu B; State Key Laboratory of Desert and Oasis Ecology, Key Laboratory of Biogeography and Bioresources in Arid Land, Center of Systematic Genomics, Xinjiang Institute of Ecology and Geography, Urumqi 830011, China., Li K; Tropical Crop Genetic Resources Institute, CATAS, Danzhou 571700, China., Peng M; Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences (CATAS), Haikou 571101, China.

Publikováno v: Nature communications [Nat Commun] 2014 Oct 10; Vol. 5, pp. 5110. Date of Electronic Publication: 2014 Oct 10.