Large-scale methods in computational genomics

Autor: Kalyanaraman, Anantharaman.

Thesis (Ph.D.)--Iowa State University, 2006.
Typescript (photocopy) Includes bibliography. Also available online.

Externí odkaz: http://proxy.lib.iastate.edu:2048/login?url=http://gateway.proquest.com/openurl?url_ver=Z39.88-2004&rft_val_fmt=info:ofi/fmt:kev:mtx:dissertation&res_dat=xri:pqdiss&rft_dat=xri:pqdiss:3229090

Genome sequencing and analysis of the model grass Brachypodium distachyon

Autor: Vogel, John P, Garvin, David F, Mockler, Todd C, Schmutz, Jeremy, Rokhsar, Dan, Bevan, Michael W, Barry, Kerrie, Lucas, Susan, Harmon-Smith, Miranda, Lail, Kathleen, Tice, Hope, Schmutz Leader, Jeremy, Grimwood, Jane, McKenzie, Neil, Huo, Naxin, Gu, Yong Q, Lazo, Gerard R, Anderson, Olin D, Vogel Leader, John P, You, Frank M, Luo, Ming-Cheng, Dvorak, Jan, Wright, Jonathan, Febrer, Melanie, Idziak, Dominika, Hasterok, Robert, Lindquist, Erika, Wang, Mei, Fox, Samuel E, Priest, Henry D, Filichkin, Sergei A, Givan, Scott A, Bryant, Douglas W, Chang, Jeff H, Mockler Leader, Todd C, Wu, Haiyan, Wu, Wei, Hsia, An-Ping, Schnable, Patrick S, Kalyanaraman, Anantharaman, Barbazuk, Brad, Michael, Todd P, Hazen, Samuel P, Bragg, Jennifer N, Laudencia-Chingcuanco, Debbie, Weng, Yiqun, Haberer, Georg, Spannagl, Manuel, Mayer Leader, Klaus, Rattei, Thomas, Mitros, Therese, Lee, Sang-Jik, Rose, Jocelyn K. C, Mueller, Lukas A, York, Thomas L, Wicker Leader, Thomas, Buchmann, Jan P, Tanskanen, Jaakko, Schulman Leader, Alan H, Gundlach, Heidrun, Bevan, Michael, Costa de Oliveira, Antonio, da C. Maia, Luciano, Belknap, William, Jiang, Ning, Lai, Jinsheng, Zhu, Liucun, Ma, Jianxin, Sun, Cheng, Pritham, Ellen, Salse Leader, Jerome, Murat, Florent, Abrouk, Michael, Mayer, Klaus, Bruggmann, Remy, Messing, Joachim, Fahlgren, Noah, Sullivan, Christopher M, Carrington, James C, Chapman, Elisabeth J, May, Greg D, Zhai, Jixian, Ganssmann, Matthias, Guna Ranjan Gurazada, Sai, German, Marcelo, Meyers, Blake C, Green Leader, Pamela J, Tyler, Ludmila, Wu, Jiajie, Thomson, James, Chen, Shan, Scheller, Henrik V, Harholt, Jesper, Ulvskov, Peter, Kimbrel, Jeffrey A, Bartley, Laura E, Cao, Peijian, Jung, Ki-Hong, Sharma, Manoj K, Vega-Sanchez, Miguel, Ronald, Pamela, Dardick, Christopher D, De Bodt, Stefanie, Verelst, Wim, Inzé, Dirk, Heese, Maren, Schnittger, Arp, Yang, Xiaohan, Kalluri, Udaya C, Tuskan, Gerald A, Hua, Zhihua, Vierstra, Richard D, Cui, Yu, Ouyang, Shuhong, Sun, Qixin, Liu, Zhiyong, Yilmaz, Alper, Grotewold, Erich, Sibout, Richard, Hematy, Kian, Mouille, Gregory, Höfte, Herman, Michael, Todd, Pelloux, Jérome, O’Connor, Devin, Schnable, James, Rowe, Scott, Harmon, Frank, Cass, Cynthia L, Sedbrook, John C, Byrne, Mary E, Walsh, Sean, Higgins, Janet, Li, Pinghua, Brutnell, Thomas, Unver, Turgay, Budak, Hikmet, Belcram, Harry, Charles, Mathieu, Chalhoub, Boulos, Baxter, Ivan

Publikováno v: Nature
Nature, Nature Publishing Group, 2010, 463, pp.763-768. ⟨10.1038/nature08747⟩
Nature, 2010, 463, pp.763-768. ⟨10.1038/nature08747⟩
Vogel, John P; Garvin, David F; Mockler, Todd C; Schmutz, Jeremy; Rokhsar, Dan; Bevan, Michael W; et al.(2010). Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463(7282), 763-768. doi: 10.1038/nature08747. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/0pd789wt

Principal investigators John P. Vogel1, David F. Garvin2, Todd C. Mockler3, Jeremy Schmutz4, Dan Rokhsar5,6, Michael W. Bevan7; DNA sequencing and assembly Kerrie Barry5, Susan Lucas5, Miranda Harmon-Smith5, Kathleen Lail5, Hope Tice5, Jeremy Schmutz

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c454b39a31be3a5b54e7f2cad10b058f
https://doi.org/10.1038/nature08747

EFFICIENT ALGORITHMS AND SOFTWARE FOR DETECTION OF FULL-LENGTH LTR RETROTRANSPOSONS.

Autor: Kalyanaraman, Anantharaman, Aluru, Srinivas

Publikováno v: Journal of Bioinformatics & Computational Biology; Apr2006, Vol. 4 Issue 2, p197-216, 20p, 5 Charts

Efficient algorithms and software for detection of full-length LTR retrotransposons.

Autor: Kalyanaraman A; Department of Electrical and Computer Engineering, Iowa State University, Ames, IA 50011, USA. ananthk@iastate.edu, Aluru S

Publikováno v: Proceedings. IEEE Computational Systems Bioinformatics Conference [Proc IEEE Comput Syst Bioinform Conf] 2005, pp. 56-64.