Validation of a metabolite-GWAS network for Populus trichocarpa family 1 UDP-glycosyltransferases.

Autor: Saint-Vincent PMB; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States., Furches A; Bredesen Center for Interdisciplinary Research, University of Tennessee, Knoxville, TN, United States., Galanie S; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States.; Protein Engineering, Merck & Co., Inc., Rahway, NJ, United States., Teixeira Prates E; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States., Aldridge JL; Department of Biomedical Sciences, Quillen College of Medicine, East Tennessee State University, Johnson City, TN, United States., Labbe A; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States., Zhao N; School of Electrical Engineering, Southeast University, Nanjing, China., Martin MZ; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States., Ranjan P; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States., Jones P; Bredesen Center for Interdisciplinary Research, University of Tennessee, Knoxville, TN, United States., Kainer D; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States., Kalluri UC; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States.; Bredesen Center for Interdisciplinary Research, University of Tennessee, Knoxville, TN, United States., Chen JG; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States.; Bredesen Center for Interdisciplinary Research, University of Tennessee, Knoxville, TN, United States., Muchero W; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States.; Bredesen Center for Interdisciplinary Research, University of Tennessee, Knoxville, TN, United States., Jacobson DA; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States.; Bredesen Center for Interdisciplinary Research, University of Tennessee, Knoxville, TN, United States., Tschaplinski TJ; Center for Bioenergy Innovation, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States.

Publikováno v: Frontiers in plant science [Front Plant Sci] 2023 Jul 21; Vol. 14, pp. 1210146. Date of Electronic Publication: 2023 Jul 21 (Print Publication: 2023).

Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor.

Autor: Payyavula RS; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Badmi R; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Jawdy SS; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Rodriguez M Jr; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Gunter L; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Sykes RW; The Biosciences Center National Renewable Energy Laboratory Golden Colorado USA., Winkeler KA; ArborGen Inc. Ridgeville South Carolina USA., Collins CM; ArborGen Inc. Ridgeville South Carolina USA., Rottmann WH; ArborGen Inc. Ridgeville South Carolina USA., Chen JG; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Yang X; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Tuskan GA; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA., Kalluri UC; BioEnergy Science Centre, Center for Bioenergy Innovation and Biosciences Division Oak Ridge National Laboratory Oak Ridge Tennessee USA.

Publikováno v: Plant direct [Plant Direct] 2022 Aug 12; Vol. 6 (8), pp. e419. Date of Electronic Publication: 2022 Aug 12 (Print Publication: 2022).

Cultivating the Bacterial Microbiota of Populus Roots.

Autor: Carper DL; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Weston DJ; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Barde A; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA.; Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee, USA., Timm CM; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Lu TY; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Burdick LH; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Jawdy SS; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Klingeman DM; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Robeson MS 2nd; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA.; Department of Biomedical Informatics, grid.241054.6University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA., Veach AM; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA.; Department of Environmental Science and Ecology, University of Texas at San Antonio, San Antonio, Texas, USA., Cregger MA; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Kalluri UC; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Schadt CW; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Podar M; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Doktycz MJ; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA., Pelletier DA; Biosciences Division, Oak Ridge National Laboratorygrid.135519.a, Oak Ridge, Tennessee, USA.

Publikováno v: MSystems [mSystems] 2021 Jun 29; Vol. 6 (3), pp. e0130620. Date of Electronic Publication: 2021 Jun 22.

Integration of fungal transcriptomics and metabolomics provides insights into the early interaction between the ORM fungus Tulasnella sp. and the orchid Serapias vomeracea seeds.

Autor: De Rose, Silvia^1,2 (AUTHOR), Sillo, Fabiano¹ (AUTHOR), Ghirardo, Andrea² (AUTHOR), Perotto, Silvia² (AUTHOR), Schnitzler, Jörg-Peter³ (AUTHOR), Balestrini, Raffaella⁴ (AUTHOR) raffaellamaria.balestrini@cnr.it

Publikováno v: IMA Fungus. 10/25/2024, Vol. 15 Issue 1, p1-25. 25p.

Plant Biosystems Design Research Roadmap 1.0.

Autor: Yang X; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Medford JI; Department of Biology, Colorado State University, Fort Collins, CO 80523, USA., Markel K; Department of Plant Biology, University of California, Davis, Davis, CA, USA., Shih PM; Department of Plant Biology, University of California, Davis, Davis, CA, USA.; Feedstocks Division, Joint BioEnergy Institute, Emeryville, CA, USA., De Paoli HC; Department of Biodesign, Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Trinh CT; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; Department of Chemical and Biomolecular Engineering, University of Tennessee, Knoxville, TN 37996, USA., McCormick AJ; SynthSys and Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, UK., Ployet R; Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa., Hussey SG; Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa., Myburg AA; Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa., Jensen PE; Department of Food Science, University of Copenhagen, Rolighedsvej 26, DK-1858, Frederiksberg, Copenhagen, Denmark., Hassan MM; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Zhang J; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, Zhejiang 311300, China., Muchero W; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Kalluri UC; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Yin H; State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, Zhejiang 311400, China., Zhuo R; State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, Zhejiang 311400, China., Abraham PE; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Chen JG; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Weston DJ; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Yang Y; Department of Plant Pathology and Environmental Microbiology and the Huck Institute of the Life Sciences, The Pennsylvania State University, University Park, PA 16802, USA., Liu D; Department of Genetics, Cell Biology and Development, Center for Precision Plant Genomics and Center for Genome Engineering, University of Minnesota, Saint Paul, MN 55108, USA., Li Y; Department of Plant Science and Landscape Architecture, University of Connecticut, Storrs, CT 06269, USA., Labbe J; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Yang B; Division of Plant Sciences, Bond Life Sciences Center, University of Missouri, Columbia, MO, USA.; Donald Danforth Plant Science Center, St. Louis, MO, USA., Lee JH; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Cottingham RW; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Martin S; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Lu M; State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, Zhejiang 311300, China., Tschaplinski TJ; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Yuan G; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Lu H; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Ranjan P; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Mitchell JC; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Wullschleger SD; Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA., Tuskan GA; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.; The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.

Publikováno v: Biodesign research [Biodes Res] 2020 Dec 05; Vol. 2020, pp. 8051764. Date of Electronic Publication: 2020 Dec 05 (Print Publication: 2020).