Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Kalle Kipper"'
Autor:
Kalle Kipper, Nadja Eremina, Emil Marklund, Sumera Tubasum, Guanzhong Mao, Laura Christina Lehmann, Johan Elf, Sebastian Deindl
Publikováno v:
PLoS ONE, Vol 13, Iss 6, p e0198416 (2018)
The lactose operon repressor protein LacI has long served as a paradigm of the bacterial transcription factors. However, the mechanisms whereby LacI rapidly locates its cognate binding site on the bacterial chromosome are still elusive. Single-molecu
Externí odkaz:
https://doaj.org/article/0fcc5db6771b4f499581f3497d38ef8c
Autor:
Ivan L, Volkov, Erik, Lundin, Kalle, Kipper, Mikhail, Metelev, Spartak, Zikrin, Magnus, Johansson
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 119(38)
Mechanistic details of the signal recognition particle (SRP)-mediated insertion of membrane proteins have been described from decades of in vitro biochemical studies. However, the dynamics of the pathway inside the living cell remain obscure. By comb
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::746c264014de722d9a615957ce7473ff
https://pubmed.ncbi.nlm.nih.gov/36095178
https://pubmed.ncbi.nlm.nih.gov/36095178
Publikováno v:
Journal of molecular biology. 434(20)
The polarized cell morphology of neurons dictates many neuronal processes, including the axodendridic transport of specific mRNAs and subsequent translation. mRNAs together with ribosomes and RNA-binding proteins form RNA granules that are targeted t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::855248c5275c8dce2790f670f0ff4bf9
https://pubmed.ncbi.nlm.nih.gov/36038000
https://pubmed.ncbi.nlm.nih.gov/36038000
Autor:
Brad Van Oosten, Sebastian Deindl, Otto G. Berg, Magnus Johansson, Guanzhong Mao, Xuan Zheng, Daniel Globisch, Elias Amselem, Emil Marklund, Laura C. Lehmann, Anton Sabantsev, Johan Elf, Kalle Kipper, Andrew Emmerich
SummaryMany proteins that bind specific DNA sequences search the genome by combining three dimensional (3D) diffusion in the cytoplasm with one dimensional (1D) sliding on non-specific DNA1–5. Here we combine resonance energy transfer and fluoresce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c604f2ede4ecf41aec033a1a23592897
https://doi.org/10.1101/2020.01.29.924647
https://doi.org/10.1101/2020.01.29.924647
Autor:
Xuan Zheng, Sebastian Deindl, Laura C. Lehmann, Andrew Emmerich, Otto G. Berg, Kalle Kipper, Elias Amselem, Brad Van Oosten, Magnus Johansson, Emil Marklund, Anton Sabantsev, Johan Elf, Daniel Globisch, Guanzhong Mao
Publikováno v:
Nature
Many proteins that bind specific DNA sequences search the genome by combining three-dimensional diffusion with one-dimensional sliding on nonspecific DNA(1-5). Here we combine resonance energy transfer and fluorescence correlation measurements to cha
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3ff60cd714c645214df17d45d0281aa1
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-439327
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-439327
Autor:
Xuan Zheng, Kalle Kipper, Johan Elf, Magnus Johansson, Sebastian Deindl, Emil Marklund, Elias Amselem
Many proteins that bind specific DNA sequences search the genome by combining three dimensional (3D) diffusion in the cytoplasm with one dimensional (1D) sliding on non-specific regions of the DNA1–5. It is however not known how sliding proteins ar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a72a53d3b7d8d3a6c4feda673775fa53
https://doi.org/10.1101/401414
https://doi.org/10.1101/401414
Autor:
Mikhail Metelev, Ka-Weng Ieong, Magnus Johansson, Kalle Kipper, Ivan L. Volkov, Johan Elf, Martin Lindén
Publikováno v:
Biophysical Journal. 116:299a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6e547636c89dd9edcf91a3669aaccc02
https://doi.org/10.1016/j.bpj.2018.11.1621
https://doi.org/10.1016/j.bpj.2018.11.1621
Autor:
Ivana Nikić, Vladimir Ćurić, Kalle Kipper, Manfred Wiessler, Johan Elf, Edward A. Lemke, Ebba G. Lundius
Publikováno v:
ACS synthetic biology. 6(2)
Small synthetic fluorophores are in many ways superior to fluorescent proteins as labels for imaging. A major challenge is to use them for a protein-specific labeling in living cells. Here, we report on our use of noncanonical amino acids that are ge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::feb9f04b676d105b3bfdf549c1c196ef
https://pubmed.ncbi.nlm.nih.gov/27775882
https://pubmed.ncbi.nlm.nih.gov/27775882
Publikováno v:
Biochimie. 93:834-844
Pseudouridine [Ψ] is a frequent base modification in the ribosomal RNA [rRNA] and may be involved in the modulation of the conformational flexibility of rRNA helix-loop structures during protein synthesis. Helix 69 of 23S rRNA contains pseudouridine
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::75634577cc2001ce950333a0b9bd2cab
https://doi.org/10.1016/j.biochi.2010.12.018
https://doi.org/10.1016/j.biochi.2010.12.018
Publikováno v:
FEBS Journal. 274:5759-5766
Pseudouridine synthase RluD converts uridines at positions 1911, 1915, and 1917 of 23S rRNA to pseudouridines. These nucleotides are located in the functionally important helix-loop 69 of 23S rRNA. RluD is the only pseudouridine synthase that is requ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::39fdd2b922d48608c5a56047971b537f
https://doi.org/10.1111/j.1742-4658.2007.06101.x
https://doi.org/10.1111/j.1742-4658.2007.06101.x