Characterization of Lysinibacillus fusiformis strain S4C11: In vitro, in planta, and in silico analyses reveal a plant-beneficial microbe

Autor: Passera, Alessandro ^*, Rossato, Marzia, Oliver, John S., Battelli, Giovanna, Shahzad, Gul-I-Rayna, Cosentino, Emanuela, Sage, Jay M., Toffolatti, Silvia L., Lopatriello, Giulia, Davis, Jennifer R., Kaiser, Michael D., Delledonne, Massimo, Casati, Paola

Publikováno v: In Microbiological Research March 2021 244

Author Correction: A robust benchmark for detection of germline large deletions and insertions

Autor: Zook, Justin M, Hansen, Nancy F, Olson, Nathan D, Chapman, Lesley, Mullikin, James C, Xiao, Chunlin, Sherry, Stephen, Koren, Sergey, Phillippy, Adam M, Boutros, Paul C, Sahraeian, Sayed Mohammad E, Huang, Vincent, Rouette, Alexandre, Alexander, Noah, Mason, Christopher E, Hajirasouliha, Iman, Ricketts, Camir, Lee, Joyce, Tearle, Rick, Fiddes, Ian T, Barrio, Alvaro Martinez, Wala, Jeremiah, Carroll, Andrew, Ghaffari, Noushin, Rodriguez, Oscar L, Bashir, Ali, Jackman, Shaun, Farrell, John J, Wenger, Aaron M, Alkan, Can, Soylev, Arda, Schatz, Michael C, Garg, Shilpa, Church, George, Marschall, Tobias, Chen, Ken, Fan, Xian, English, Adam C, Rosenfeld, Jeffrey A, Zhou, Weichen, Mills, Ryan E, Sage, Jay M, Davis, Jennifer R, Kaiser, Michael D, Oliver, John S, Catalano, Anthony P, Chaisson, Mark JP, Spies, Noah, Sedlazeck, Fritz J, Salit, Marc

Publikováno v: Nature biotechnology, vol 38, iss 11

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::c72ace7a0f40b97727a7a515d4310482
https://escholarship.org/uc/item/03j114w5

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Author Correction: A robust benchmark for detection of germline large deletions and insertions.

Autor: Zook JM; Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA. jzook@nist.gov., Hansen NF; National Human Genome Research Institute, National Institutes of Health, Rockville, MD, USA., Olson ND; Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA., Chapman L; Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA., Mullikin JC; National Human Genome Research Institute, National Institutes of Health, Rockville, MD, USA., Xiao C; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA., Sherry S; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA., Koren S; National Human Genome Research Institute, National Institutes of Health, Rockville, MD, USA., Phillippy AM; National Human Genome Research Institute, National Institutes of Health, Rockville, MD, USA., Boutros PC; Department of Human Genetics, University of California, Los Angeles, Los Angeles, CA, USA., Sahraeian SME; Roche Sequencing Solutions, Belmont, CA, USA., Huang V; Ontario Institute for Cancer Research, Toronto, Ontario, Canada., Rouette A; Charles-Bruneau Cancer Centre, Division of Hematology-Oncology, CHU Sainte-Justine, Montreal, Quebec, Canada., Alexander N; Molecular Biology Institute, University of California, Los Angeles, Los Angeles CA, USA., Mason CE; Department of Physiology and Biophysics, Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.; The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.; The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY, USA.; The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA., Hajirasouliha I; Department of Physiology and Biophysics, Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA., Ricketts C; Department of Physiology and Biophysics, Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA., Lee J; Bionano Genomics, Inc., San Diego, CA, USA., Tearle R; Davies Research Centre, School of Animal and Veterinary Sciences, University of Adelaide, Roseworthy, SA, Australia., Fiddes IT; 10× Genomics, Pleasanton, CA, USA., Barrio AM; 10× Genomics, Pleasanton, CA, USA., Wala J; Broad Institute of Harvard and MIT, Cambridge, MA, USA., Carroll A; Google, Mountain View, CA, USA., Ghaffari N; Department of Computer Science, Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, TX, USA., Rodriguez OL; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Bashir A; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Jackman S; BC Cancer Genome Sciences Centre, Vancouver, British Columbia, Canada., Farrell JJ; Biomedical Genetics, Department of Medicine, Boston University Medical School, Boston, MA, USA., Wenger AM; Pacific Biosciences, Menlo Park, CA, USA., Alkan C; Department of Computer Engineering, Bilkent University, Ankara, Turkey., Soylev A; Department of Computer Engineering, Konya Food and Agriculture University, Konya, Turkey., Schatz MC; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA., Garg S; Department of Genetics, Harvard Medical School, Boston, MA, USA., Church G; Department of Genetics, Harvard Medical School, Boston, MA, USA., Marschall T; Heinrich Heine University, Medical Faculty, Düsseldorf, Germany., Chen K; Department of Bioinformatics and Computational Biology, MD Anderson Cancer Center, Houston, TX, USA., Fan X; Department of Computer Science, Rice University, Houston, TX, USA., English AC; Bioinformatics R&D, Spiral Genetics, Seattle, WA, USA., Rosenfeld JA; Rutgers Cancer Institute of New Jersey, New Brunswick, NJ, USA.; Department of Pathology, Robert Wood Johnson Medical School, New Brunswick, NJ, USA., Zhou W; Department of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA., Mills RE; Department of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA., Sage JM; Nabsys 2.0, LLC, Providence, RI, USA., Davis JR; Nabsys 2.0, LLC, Providence, RI, USA., Kaiser MD; Nabsys 2.0, LLC, Providence, RI, USA., Oliver JS; Nabsys 2.0, LLC, Providence, RI, USA., Catalano AP; Nabsys 2.0, LLC, Providence, RI, USA., Chaisson MJP; Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA., Spies N; Joint Initiative for Metrology in Biology, SLAC National Accelerator Lab, Stanford University, Stanford, CA, USA., Sedlazeck FJ; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA., Salit M; Joint Initiative for Metrology in Biology, SLAC National Accelerator Lab, Stanford University, Stanford, CA, USA.

Publikováno v: Nature biotechnology [Nat Biotechnol] 2020 Nov; Vol. 38 (11), pp. 1357.