Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Kai Christian Bader"'
Publikováno v:
Methods in Molecular Biology ISBN: 9781493966561
Plant Genome and Systems Biology (PGSB), formerly Munich Institute for Protein Sequences (MIPS) PlantsDB, is a database framework for the integration and analysis of plant genome data, developed and maintained for more than a decade now. Major compon
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2d57ea2dcb1240daccc84a2ddcc344c5
https://doi.org/10.1007/978-1-4939-6658-5_2
https://doi.org/10.1007/978-1-4939-6658-5_2
Publikováno v:
Bioinformatics. 27:1546-1554
Motivation: PCR, hybridization, DNA sequencing and other important methods in molecular diagnostics rely on both sequence-specific and sequence group-specific oligonucleotide primers and probes. Their design depends on the identification of oligonucl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::79538eefaf307c51c924a9109b043613
https://doi.org/10.1093/bioinformatics/btr161
https://doi.org/10.1093/bioinformatics/btr161
Autor:
Karl G. Kugler, Kai Christian Bader, Mihaela Martis, Heidrun Gundlach, Michael Seidel, Thomas Nussbaumer, Manuel Spannagl, Klaus F. X. Mayer
Publikováno v:
Nucleic Acids Res. 44, D1141-D1147 (2016)
Nucleic Acids Research
Nucleic Acids Research
PGSB (Plant Genome and Systems Biology: formerly MIPS) PlantsDB (http://pgsb.helmholtz-muenchen.de/plant/index.jsp) is a database framework for the comparative analysis and visualization of plant genome data. The resource has been updated with new da
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ac1692f38308625ae936733c5a665b07
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=47184
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=47184
Publikováno v:
Plant Bioinformatics ISBN: 9781493931668
PGSB (Plant Genome and Systems Biology; formerly MIPS-Munich Institute for Protein Sequences) has been involved in developing, implementing and maintaining plant genome databases for more than a decade. Genome databases and analysis resources have fo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f28a21459d4069e0e50b0ef0759de6e2
https://doi.org/10.1007/978-1-4939-3167-5_8
https://doi.org/10.1007/978-1-4939-3167-5_8
Autor:
Yu Wang, Chris-Carolin Schön, Eva Bauer, Kai Christian Bader, Svenja Alter, Manuel Spannagl, Klaus F. X. Mayer
Publikováno v:
Database: The Journal of Biological Databases and Curation
Database 2015:bav046 (2015)
Database 2015:bav046 (2015)
Plants are sessile and therefore exposed to a number of biotic and abiotic stresses. Drought is the major abiotic stress restricting plant growth worldwide. A number of genes involved in drought stress response have already been characterized, mainly
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2242156972265c226d9c250048aa4e71
https://mediatum.ub.tum.de/1319975
https://mediatum.ub.tum.de/1319975
Autor:
Primetta Faccioli, Patrick Wincker, Heidrun Gundlach, Matthias Zytnicki, Ricardo H. Ramirez-Gonzalez, Robbie Waugh, David Edwards, Hikmet Budak, Darrin Klassen, M. Kubaláková, Jianzhong Wu, Catherine Feuillet, Beat Keller, Kellye Eversole, Matthew I. Bellgard, Nagendra K. Singh, Hadi Quesneville, Melanie Febrer, Kai Christian Bader, Claire Viseux, Parveen Chhuneja, Jacqueline Batley, Ron Knox, Bernd Friebe, Adam J. Lukaszewski, Yasunari Ogihara, Adriana Alberti, Gary J. Muehlbauer, Kuldeep Singh, Manuel Spannagl, Luigi Cattivelli, Tsuyoshi Tanaka, Zdeňka Dubská, Uwe Scholz, Thomas Wicker, Véronique Jamilloux, Mikaël Loaec, Jane Rogers, Odd-Arne Olsen, Thomas Nussbaumer, Hélène Rimbert, Hirokazu Handa, Andrzej Kilian, Natasha Glover, Antonio Michele Stanca, Eduard Akhunov, Hiroaki Sakai, Loïc Couderc, Romana Šperková, Françoise Alfama, Sébastien Praud, Jonathan M. Wright, Sarah Ayling, Brett Chapman, Kirsten McLay, Jesse Poland, Martin Mascher, Etienne Paux, Kerrie Barry, Jaroslav Doležel, Mario Caccamo, Daniel S. Rokhsar, Andrew G. Sharpe, Jitendra P. Khurana, Bernardo J. Clavijo, Takashi R. Endo, Sigbjørn Lien, Leah Clissold, Michael Alaux, Fuminori Kobayashi, Valérie Barbe, Shichen Wang, Takashi Matsumoto, Simen Rød Sandve, Brande B. H. Wulff, Sapna Sharma, Matthias Pfeifer, Hiroyuki Kanamori, Moreno Colaiacovo, P. Ron Maclachlan, Mihaela Martis, Bikram S. Gill, Hana Šimková, Jan Vrána, Takeshi Itoh, Jarmila Číhalíková, Jarrod Chapman, Pierre Sourdille, Rudi Appels, Nils Stein, Burkhard Steuernagel, Frédéric Choulet, Nicolas Guilhot, Curtis J. Pozniak, Lise Pingault, Klaus F. X. Mayer
Publikováno v:
Science
Science, American Association for the Advancement of Science (AAAS), 2014, 345 (6194), pp.1251788. ⟨10.1126/science.1251788⟩
Science, American Association for the Advancement of Science, 2014, 345 (6194), pp.1251788. ⟨10.1126/science.1251788⟩
Science, American Association for the Advancement of Science (AAAS), 2014, 345 (6194), pp.1251788. ⟨10.1126/science.1251788⟩
Science, American Association for the Advancement of Science, 2014, 345 (6194), pp.1251788. ⟨10.1126/science.1251788⟩
La liste complète des auteurs et leurs affiliations sont disponibles à la fin de l'article - 96 collaborateurs : Mayer KF, Rogers J, Doležel J, Pozniak C, Eversole K, Feuillet C, Gill B, Friebe B, Lukaszewski AJ, Sourdille P, Endo TR, Kubaláková
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2d412ad23bb75765a546e4941bc3616
https://nrc-publications.canada.ca/eng/view/object/?id=1b1bdc02-3b35-4804-8cf8-69093ac64bed
https://nrc-publications.canada.ca/eng/view/object/?id=1b1bdc02-3b35-4804-8cf8-69093ac64bed
chromoWIZ: A web tool to query and visualize chromosome-anchored genes from cereal and model genomes
Autor:
Kai Christian Bader, Thomas Nussbaumer, Naser Poursarebani, Manuel Spannagl, Klaus F. X. Mayer, Karl G. Kugler, Wolfgang Schweiger, Heidrun Gundlach, Matthias Pfeifer
Publikováno v:
BMC Plant Biol. 14:348 (2014)
BMC Plant Biology
BMC Plant Biology
Background Over the last years reference genome sequences of several economically and scientifically important cereals and model plants became available. Despite the agricultural significance of these crops only a small number of tools exist that all
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f58eda52ccf74294bf9ab260666b418a
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=42988
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=42988
Autor:
Matthias Pfeifer, Thomas Nussbaumer, Heidrun Gundlach, Manuel Spannagl, Sapna Sharma, Stephan K. Roessner, Mihaela Martis, Kai Christian Bader
Publikováno v:
Nucleic Acids Res. 41, D1144-D1151 (2013)
Nucleic Acids Research
Nucleic Acids Research
The rapidly increasing amount of plant genome (sequence) data enables powerful comparative analyses and integrative approaches and also requires structured and comprehensive information resources. Databases are needed for both model and crop plant or
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3652221ac2634d10655579b3426d3dcb
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=11721
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=11721
Publikováno v:
ACM Journal of Experimental Algorithmics. 17
This article presents a new algorithm for finding oligonucleotide signatures that are specific and sensitive for organisms or groups of organisms in large-scale sequence datasets. We assume that the organisms have been organized in a hierarchy, for e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::537019bea07d5325f5b1b8b98d2cfbca
https://doi.org/10.1145/2133803.2212315
https://doi.org/10.1145/2133803.2212315