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The Delta variant wave in Tunisia: Genetic diversity, spatio-temporal distribution and evidence of the spread of a divergent AY.122 sub-lineage.

Autor: Haddad-Boubaker S; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Clinical Investigation Center (CIC), Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia., Arbi M; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Bioinformatics, Biomathematics and Biostatistics, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia., Souiai O; Laboratory of Bioinformatics, Biomathematics and Biostatistics, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia., Chouikha A; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Clinical Investigation Center (CIC), Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia., Fares W; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Clinical Investigation Center (CIC), Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia., Edington K; New Variant Assessment Platform (NVAP), UK Health Security Agency, London, United Kingdom., Sims S; New Variant Assessment Platform (NVAP), UK Health Security Agency, London, United Kingdom., Camma C; Department of Virology, Instituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G. Caporale (IZSAM), Teramo, Italy., Lorusso A; Department of Virology, Instituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G. Caporale (IZSAM), Teramo, Italy., Diagne MM; Department of Virology, Pasteur Institute of Dakar, Dakar, Senegal., Diallo A; Department of Virology, Pasteur Institute of Dakar, Dakar, Senegal., Boubaker IBB; Laboratory of Microbiology, Charles Nicolle Hospital, Tunis, Tunisia.; Laboratory Research Antimicrobial Resistance, Faculty of Medicine of Tunis, University of Tunis El-Manar, Tunis, Tunisia., Ferjani S; Laboratory of Microbiology, Charles Nicolle Hospital, Tunis, Tunisia.; Laboratory Research Antimicrobial Resistance, Faculty of Medicine of Tunis, University of Tunis El-Manar, Tunis, Tunisia., Mastouri M; Laboratory of Microbiology, Fattouma Bourguiba Hospital, Monastir, Tunisia.; Laboratory Research Laboratoire des Maladies Transmissibles et Substances Biologiquement Actives, Faculty of Pharmacy of Monastir, University of Monastir, Monastir, Tunisia., Mhalla S; Laboratory of Microbiology, Fattouma Bourguiba Hospital, Monastir, Tunisia.; Laboratory Research Laboratoire des Maladies Transmissibles et Substances Biologiquement Actives, Faculty of Pharmacy of Monastir, University of Monastir, Monastir, Tunisia., Karray H; Laboratory of Microbiology, Habib Bourguiba Hospital, Sfax, Tunisia., Gargouri S; Laboratory of Microbiology, Habib Bourguiba Hospital, Sfax, Tunisia., Bahri O; Laboratory of Microbiology and Biochemistry, Aziza Othmana Hospital, Tunis, Tunisia., Trabelsi A; Laboratory of Virology, Sahloul Hospital of Sousse, Sousse, Tunisia., Kallala O; Laboratory of Virology, Sahloul Hospital of Sousse, Sousse, Tunisia., Hannachi N; Laboratory of Microbiology, Farhat Hached Hospital of Sousse, Sousse, Tunisia., Chaabouni Y; Laboratory of Medical Biology, Ibn El Jazzar Hospital, Kairouan, Tunisia.; Department of Microbiology, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia., Smaoui H; Department of Microbiology, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia.; Laboratory of Microbiology, Microbiology of Children and Immunocompromised, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia.; Laboratory of Microbiology, Bechir Hamza Children's Hospital, Tunis, Tunisia., Meftah K; Department of Microbiology, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia.; Laboratory of Microbiology, Microbiology of Children and Immunocompromised, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia.; Laboratory of Microbiology, Bechir Hamza Children's Hospital, Tunis, Tunisia., Bouhalila SB; Laboratory of Medical Biology and Blood Bank, Institute Mohamed Kassab d'orthopédie, Manouba, Tunisia., Foughali S; Laboratory of Medical Biology, Menzel Bourguiba Hospital, Bizerte, Tunisia., Zribi M; Laboratory of Microbiology, La Rabta Hospital, Tunis, Tunisia., Lamari A; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia., Touzi H; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Clinical Investigation Center (CIC), Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia., Safer M; National Observatory of New and Emergent Diseases, Tunis, Tunisia., Alaya NB; Department of Microbiology, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia.; National Observatory of New and Emergent Diseases, Tunis, Tunisia., Kahla AB; Laboratory of Bioinformatics, Biomathematics and Biostatistics, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia., Gdoura M; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Clinical Investigation Center (CIC), Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Department of Virology, Faculty of Pharmacy of Monastir, University of Monastir, Monastir, Tunisia., Triki H; Laboratory of Clinical Virology, WHO Regional Reference Laboratory for Poliomyelitis and Measles for the EMR, Institute Pasteur de Tunis, University of Tunis El-Manar, Tunis, Tunisia.; Laboratory of Viruses, Hosts and Vectors, Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Clinical Investigation Center (CIC), Institute Pasteur de Tunis, University of Tunis El Manar, Tunis, Tunisia.; Department of Microbiology, Faculty of Medicine of Tunis, University of Tunis El Manar, Tunis, Tunisia.

Publikováno v: Frontiers in public health [Front Public Health] 2023 Jan 04; Vol. 10, pp. 990832. Date of Electronic Publication: 2023 Jan 04 (Print Publication: 2022).