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Addressing IGHV Gene Structural Diversity Enhances Immunoglobulin Repertoire Analysis: Lessons From Rhesus Macaque

Autor: Kaduk M, Corcoran M and Karlsson Hedestam GB

Publikováno v: Frontiers in Immunology

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=r3c4b2081b22::a0baaae990c4c6ef7607ae857fc297e1

Archaic humans have contributed to large-scale variation in modern human T cell receptor genes.

Autor: Corcoran M; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden. Electronic address: martin.corcoran@ki.se., Chernyshev M; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden., Mandolesi M; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden., Narang S; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden., Kaduk M; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden., Ye K; Department of Medicine, Solna, Karolinska Institutet and Karolinska University Hospital, Stockholm, Sweden; Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden., Sundling C; Department of Medicine, Solna, Karolinska Institutet and Karolinska University Hospital, Stockholm, Sweden; Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden; Department of Infectious Diseases, Karolinska University Hospital, 171 76 Stockholm, Sweden., Färnert A; Department of Medicine, Solna, Karolinska Institutet and Karolinska University Hospital, Stockholm, Sweden; Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden; Department of Infectious Diseases, Karolinska University Hospital, 171 76 Stockholm, Sweden., Kreslavsky T; Department of Medicine, Solna, Karolinska Institutet and Karolinska University Hospital, Stockholm, Sweden; Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden., Bernhardsson C; Department of Organismal Biology, Human Evolution, Norbyvägen 18C, 752 63 Uppsala, Sweden., Larena M; Department of Organismal Biology, Human Evolution, Norbyvägen 18C, 752 63 Uppsala, Sweden., Jakobsson M; Department of Organismal Biology, Human Evolution, Norbyvägen 18C, 752 63 Uppsala, Sweden., Karlsson Hedestam GB; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 77 Stockholm, Sweden. Electronic address: gunilla.karlsson.hedestam@ki.se.

Publikováno v: Immunity [Immunity] 2023 Mar 14; Vol. 56 (3), pp. 635-652.e6. Date of Electronic Publication: 2023 Feb 15.

Evolution of protein domain architectures

Autor: Forslund, S.K., Kaduk, M., Sonnhammer, E.L.L.

This chapter reviews current research on how protein domain architectures evolve. We begin by summarizing work on the phylogenetic distribution of proteins, as this will directly impact which domain architectures can be formed in different species. S

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=mdc______med::6a06eca1b5abe0b14d8289adc56ac87d
http://edoc.mdc-berlin.de/18315/1/18315oa.pdf

Correlated measurement error hampers association network inference

Autor: Kaduk, M., Hoefsloot, H.C.J., Vis, D.J., Reijmers, T., van der Greef, J., Smilde, A.K., Hendriks, M.M.W.B.

Publikováno v: Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 966, 93-99
Journal of Chromatography B, 966, 93-99. Elsevier

Modern chromatography-based metabolomics measurements generate large amounts of data in the form of abundances of metabolites. An increasingly popular way of representing and analyzing such data is by means of association networks. Ideally, such a ne

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::ce77c9e21c6b1a7b5d98131966f11121
http://resolver.tudelft.nl/uuid:19e85e46-845d-4bb2-a60c-0241444cfe3b