Zobrazeno 1 - 10
of 42
pro vyhledávání: '"Justin N. Vaughn"'
Publikováno v:
Frontiers in Plant Science, Vol 14 (2023)
Soybean meal is a major component of livestock feed due to its high content and quality of protein. Understanding the genetic control of protein is essential to develop new cultivars with improved meal protein. Previously, a genomic region on chromos
Externí odkaz:
https://doaj.org/article/003305b87f3c45fdb2b7435b49f7524c
Autor:
Justin N. Vaughn, Sandra E. Branham, Brian Abernathy, Amanda M. Hulse-Kemp, Adam R. Rivers, Amnon Levi, William P. Wechter
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-14 (2022)
The power of pangenomic graphs to improve genetic mapping is still unclear. Here, the authors demonstrate its value in identification of genetic variants associated with disease resistance traits in melon using PanPipes, a pangenome construction and
Externí odkaz:
https://doaj.org/article/2edc9b2e0e0a44ccb0e3ceffeaa28fb8
Autor:
Jake C. Fountain, Josh P. Clevenger, Brian Nadon, Ramey C. Youngblood, Walid Korani, Perng-Kuang Chang, Dakota Starr, Hui Wang, Benjamin Isett, H. Richard Johnston, Raegan Wiggins, Gaurav Agarwal, Ye Chu, Robert C. Kemerait, Manish K. Pandey, Deepak Bhatnagar, Peggy Ozias-Akins, Rajeev K. Varshney, Brian E. Scheffler, Justin N. Vaughn, Baozhu Guo
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 10, Pp 3515-3531 (2020)
Efforts in genome sequencing in the Aspergillus genus have led to the development of quality reference genomes for several important species including A. nidulans, A. fumigatus, and A. oryzae. However, less progress has been made for A. flavus. As pa
Externí odkaz:
https://doaj.org/article/3f900438506e40e9b5db656258b23d6f
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 9, Iss 7, Pp 2253-2265 (2019)
Genomic selection (GS) has become viable for selection of quantitative traits for which marker-assisted selection has often proven less effective. The potential of GS for soybean was characterized using 483 elite breeding lines, genotyped with BARCSo
Externí odkaz:
https://doaj.org/article/5501738c3b3c4aca9fb34ffb5b8225c6
Gene loss and genome rearrangement in the plastids of five Hemiparasites in the family Orobanchaceae
Autor:
Daniel C. Frailey, Srinivasa R. Chaluvadi, Justin N. Vaughn, Caroline G. Coatney, Jeffrey L. Bennetzen
Publikováno v:
BMC Plant Biology, Vol 18, Iss 1, Pp 1-12 (2018)
Abstract Background The chloroplast genomes (plastome) of most plants are highly conserved in structure, gene content, and gene order. Parasitic plants, including those that are fully photosynthetic, often contain plastome rearrangements. These most
Externí odkaz:
https://doaj.org/article/59c79bb5b4df4806a14c3ba02f4570be
Autor:
Jean Guard, Adam R. Rivers, Justin N. Vaughn, Michael J. Rothrock, Jr., Adelumola Oladeinde, Devendra H. Shah
Publikováno v:
Microorganisms, Vol 9, Iss 10, p 2075 (2021)
Adenine and thymine homopolymer strings of at least 8 nucleotides (AT 8+mers) were characterized in Salmonella enterica subspecies I. The motif differed between other taxonomic classes but not between Salmonella enterica serovars. The motif in plasmi
Externí odkaz:
https://doaj.org/article/28cc38083c7b46eb9f25969b15009773
Autor:
Justin N. Vaughn, Zenglu Li
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 6, Iss 9, Pp 2693-2705 (2016)
Crop improvement represents a long-running experiment in artificial selection on a complex trait, namely yield. How such selection relates to natural populations is unclear, but the analysis of domesticated populations could offer insights into the r
Externí odkaz:
https://doaj.org/article/cc818a29ed9547a8a14cb31772fe4ca4
Autor:
Justin N. Vaughn, Sandra E. Branham, Brian L. Abernathy, Amanda M. Hulse-Kemp, Adam Rivers, Amnon Levi, William P. Wechter
The genomic sequences segregating in experimental populations are often highly divergent from the community reference and from one another. Such divergence is problematic under various short-read-based genotyping strategies. In addition, large struct
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ff5ce1663e6854d78c05f373b40b5a19
https://doi.org/10.1101/2022.06.10.495676
https://doi.org/10.1101/2022.06.10.495676
Autor:
Brian E. Scheffler, Baozhu Guo, Josh Clevenger, Rajeev K. Varshney, Manish K. Pandey, Raegan Wiggins, Brian Nadon, Robert C. Kemerait, H. Richard Johnston, Walid Korani, Dakota Starr, Justin N. Vaughn, Gaurav Agarwal, Deepak Bhatnagar, Perng-Kuang Chang, Peggy Ozias-Akins, Ye Chu, Ramey C Youngblood, Benjamin Isett, Jake C. Fountain, Hui Wang
Publikováno v:
G3: Genes|Genomes|Genetics
G3: Genes, Genomes, Genetics, Vol 10, Iss 10, Pp 3515-3531 (2020)
G3: Genes, Genomes, Genetics, Vol 10, Iss 10, Pp 3515-3531 (2020)
Efforts in genome sequencing in the Aspergillus genus have led to the development of quality reference genomes for several important species including A. nidulans, A. fumigatus, and A. oryzae. However, less progress has been made for A. flavus. As pa
Publikováno v:
Microbiology Resource Announcements