Zobrazeno 1 - 10
of 46
pro vyhledávání: '"Juris, Viksna"'
Autor:
Juris Viksna, Gatis Melkus, Edgars Celms, Kārlis Čerāns, Karlis Freivalds, Paulis Kikusts, Lelde Lace, Mārtiņš Opmanis, Darta Rituma, Peteris Rucevskis
Publikováno v:
BMC Bioinformatics, Vol 20, Iss S23, Pp 1-17 (2019)
Abstract Background Current Hi-C technologies for chromosome conformation capture allow to understand a broad spectrum of functional interactions between genome elements. Although significant progress has been made into analysis of Hi-C data to ident
Externí odkaz:
https://doaj.org/article/f3f3cda307524bdbb23c20841a86f874
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-14 (2019)
Abstract Background Gene regulatory networks can be modelled in various ways depending on the level of detail required and biological questions addressed. One of the earliest formalisms used for modeling is a Boolean network, although these models ca
Externí odkaz:
https://doaj.org/article/4e939eaec33c4b76ac30f63c88aedf39
Autor:
Rosamonde E. Banks, Yasser Riazalhosseini, Mark Lathrop, Paul Brennan, Jörg Tost, Alvis Brazma, Guillaume Bourque, Anne Cambon-Thomsen, Bozidar Kovacevic, Ljiljana Bogdanovic, Viorel Jinga, Dana Mates, Marie Navratilova, Lenka Foretova, Oxana Shangina, Anush Moukeria, David Zaridze, Estelle Chanudet, Vladimir Janout, Antonin Brisuda, Ivana Holcatova, Magdalena B. Wozniak, Poulam M. Patel, Adebanji Adeyoju, Naeem Soomro, Jon Cartledge, Michael Kimuli, Sebastian Trainor, Peter J. Selby, Anne Y. Warren, Behnoush Abedi-Ardekani, Sharon M. Jackson, Edgars Celms, Juris Viksna, Lars Egevad, Antoine Paccard, Madeleine Arseneault, Nazanin Nourbehesht, Robert Eveleigh, Louis Letourneau, Michelle Wilson, Kate I. Glennon, Ghislaine Scelo, Naveen S. Vasudev
DFS by tumor stage stratified by genomic classifier
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::488e7036b695217ade6f4e29fda2006b
https://doi.org/10.1158/1078-0432.22495083.v1
https://doi.org/10.1158/1078-0432.22495083.v1
Autor:
Rosamonde E. Banks, Yasser Riazalhosseini, Mark Lathrop, Paul Brennan, Jörg Tost, Alvis Brazma, Guillaume Bourque, Anne Cambon-Thomsen, Bozidar Kovacevic, Ljiljana Bogdanovic, Viorel Jinga, Dana Mates, Marie Navratilova, Lenka Foretova, Oxana Shangina, Anush Moukeria, David Zaridze, Estelle Chanudet, Vladimir Janout, Antonin Brisuda, Ivana Holcatova, Magdalena B. Wozniak, Poulam M. Patel, Adebanji Adeyoju, Naeem Soomro, Jon Cartledge, Michael Kimuli, Sebastian Trainor, Peter J. Selby, Anne Y. Warren, Behnoush Abedi-Ardekani, Sharon M. Jackson, Edgars Celms, Juris Viksna, Lars Egevad, Antoine Paccard, Madeleine Arseneault, Nazanin Nourbehesht, Robert Eveleigh, Louis Letourneau, Michelle Wilson, Kate I. Glennon, Ghislaine Scelo, Naveen S. Vasudev
Supplementary Methods
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::65313f8ad3eddf184684c4275925538b
https://doi.org/10.1158/1078-0432.22495080
https://doi.org/10.1158/1078-0432.22495080
Autor:
Rosamonde E. Banks, Yasser Riazalhosseini, Mark Lathrop, Paul Brennan, Jörg Tost, Alvis Brazma, Guillaume Bourque, Anne Cambon-Thomsen, Bozidar Kovacevic, Ljiljana Bogdanovic, Viorel Jinga, Dana Mates, Marie Navratilova, Lenka Foretova, Oxana Shangina, Anush Moukeria, David Zaridze, Estelle Chanudet, Vladimir Janout, Antonin Brisuda, Ivana Holcatova, Magdalena B. Wozniak, Poulam M. Patel, Adebanji Adeyoju, Naeem Soomro, Jon Cartledge, Michael Kimuli, Sebastian Trainor, Peter J. Selby, Anne Y. Warren, Behnoush Abedi-Ardekani, Sharon M. Jackson, Edgars Celms, Juris Viksna, Lars Egevad, Antoine Paccard, Madeleine Arseneault, Nazanin Nourbehesht, Robert Eveleigh, Louis Letourneau, Michelle Wilson, Kate I. Glennon, Ghislaine Scelo, Naveen S. Vasudev
Clinical information and 12 gene mutation status for cohorts C1-C3
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::55e39edcfce3277be14424c7455ecb1e
https://doi.org/10.1158/1078-0432.22495077
https://doi.org/10.1158/1078-0432.22495077
Autor:
Rosamonde E. Banks, Yasser Riazalhosseini, Mark Lathrop, Paul Brennan, Jörg Tost, Alvis Brazma, Guillaume Bourque, Anne Cambon-Thomsen, Bozidar Kovacevic, Ljiljana Bogdanovic, Viorel Jinga, Dana Mates, Marie Navratilova, Lenka Foretova, Oxana Shangina, Anush Moukeria, David Zaridze, Estelle Chanudet, Vladimir Janout, Antonin Brisuda, Ivana Holcatova, Magdalena B. Wozniak, Poulam M. Patel, Adebanji Adeyoju, Naeem Soomro, Jon Cartledge, Michael Kimuli, Sebastian Trainor, Peter J. Selby, Anne Y. Warren, Behnoush Abedi-Ardekani, Sharon M. Jackson, Edgars Celms, Juris Viksna, Lars Egevad, Antoine Paccard, Madeleine Arseneault, Nazanin Nourbehesht, Robert Eveleigh, Louis Letourneau, Michelle Wilson, Kate I. Glennon, Ghislaine Scelo, Naveen S. Vasudev
Supplementary Tables S3-S13
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::17728ed00320af351893f2bbdc9a0681
https://doi.org/10.1158/1078-0432.22490785.v1
https://doi.org/10.1158/1078-0432.22490785.v1
Autor:
Rosamonde E. Banks, Yasser Riazalhosseini, Mark Lathrop, Paul Brennan, Jörg Tost, Alvis Brazma, Guillaume Bourque, Anne Cambon-Thomsen, Bozidar Kovacevic, Ljiljana Bogdanovic, Viorel Jinga, Dana Mates, Marie Navratilova, Lenka Foretova, Oxana Shangina, Anush Moukeria, David Zaridze, Estelle Chanudet, Vladimir Janout, Antonin Brisuda, Ivana Holcatova, Magdalena B. Wozniak, Poulam M. Patel, Adebanji Adeyoju, Naeem Soomro, Jon Cartledge, Michael Kimuli, Sebastian Trainor, Peter J. Selby, Anne Y. Warren, Behnoush Abedi-Ardekani, Sharon M. Jackson, Edgars Celms, Juris Viksna, Lars Egevad, Antoine Paccard, Madeleine Arseneault, Nazanin Nourbehesht, Robert Eveleigh, Louis Letourneau, Michelle Wilson, Kate I. Glennon, Ghislaine Scelo, Naveen S. Vasudev
Purpose:Patients with resected localized clear-cell renal cell carcinoma (ccRCC) remain at variable risk of recurrence. Incorporation of biomarkers may refine risk prediction and inform adjuvant treatment decisions. We explored the role of tumor geno
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2716625cf6fe546af02d95a7ec139044
https://doi.org/10.1158/1078-0432.c.6533221.v1
https://doi.org/10.1158/1078-0432.c.6533221.v1
Publikováno v:
Journal of bioinformatics and computational biology. 20(5)
We present hybrid system-based gene regulatory network models for lambda, HK022, and Mu bacteriophages together with dynamics analysis of the modeled networks. The proposed lambda phage model LPH2 is based on an earlier work and incorporates more rec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e4b15294dd5afc6635c7ecc770d76a5
https://pubmed.ncbi.nlm.nih.gov/36102744
https://pubmed.ncbi.nlm.nih.gov/36102744
Publikováno v:
Proceedings of the 15th International Joint Conference on Biomedical Engineering Systems and Technologies.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::30da3b432b2c65e2a306eb27d66c5bff
https://doi.org/10.5220/0010834400003123
https://doi.org/10.5220/0010834400003123
Autor:
George Nicholson, Mattias Rantalainen, Anthony D Maher, Jia V Li, Daniel Malmodin, Kourosh R Ahmadi, Johan H Faber, Ingileif B Hallgrímsdóttir, Amy Barrett, Henrik Toft, Maria Krestyaninova, Juris Viksna, Sudeshna Guha Neogi, Marc‐Emmanuel Dumas, Ugis Sarkans, The MolPAGE Consortium, Bernard W Silverman, Peter Donnelly, Jeremy K Nicholson, Maxine Allen, Krina T Zondervan, John C Lindon, Tim D Spector, Mark I McCarthy, Elaine Holmes, Dorrit Baunsgaard, Chris C Holmes
Publikováno v:
Molecular Systems Biology, Vol 7, Iss 1, Pp 1-12 (2011)
Abstract 1H Nuclear Magnetic Resonance spectroscopy (1H NMR) is increasingly used to measure metabolite concentrations in sets of biological samples for top‐down systems biology and molecular epidemiology. For such purposes, knowledge of the source
Externí odkaz:
https://doaj.org/article/f335db8f4a53437692b5541fc67ede7b