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Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

Autor: Xi, Ruibin, Jain, Dhawal, Jung, Youngsook L., Yang, Lixing, Gordenin, Dmitry, Pellman, David S., Akdemir, Kadir C., Alvarez, Eva G., Baez-Ortega, Adrian, Beroukhim, Rameen, Boutros, Paul C., Bowtell, David D. L., Brors, Benedikt, Burns, Kathleen H., Campbell, Peter J., Chan, Kin, Chen, Ken, Cortés-Ciriano, Isidro, Dueso-Barroso, Ana, Dunford, Andrew J., Edwards, Paul A., Estivill, Xavier, Etemadmoghadam, Dariush, Feuerbach, Lars, Fink, J. Lynn, Frenkel-Morgenstern, Milana, Garsed, Dale W., Gerstein, Mark, Gordenin, Dmitry A., Haan, David, Haber, James E., Hess, Julian M., Hutter, Barbara, Imielinski, Marcin, Jones, David T. W., Ju, Young Seok, Kazanov, Marat D., Klimczak, Leszek J., Koh, Youngil, Korbel, Jan O., Kumar, Kiran, Lee, Eunjung Alice, Lee, Jake June-Koo, Li, Yilong, Lynch, Andy G., Macintyre, Geoff, Markowetz, Florian, Martincorena, Iñigo, Martinez-Fundichely, Alexander, Miyano, Satoru, Nakagawa, Hidewaki, Navarro, Fabio C. P., Ossowski, Stephan, Park, Peter J., Pearson, John V., Puiggròs, Montserrat, Rippe, Karsten, Roberts, Nicola D., Roberts, Steven A., Rodriguez-Martin, Bernardo, Schumacher, Steven E., Scully, Ralph, Shackleton, Mark, Sidiropoulos, Nikos, Sieverling, Lina, Stewart, Chip, Torrents, David, Tubio, Jose M. C., Villasante, Izar, Waddell, Nicola, Wala, Jeremiah A., Weischenfeldt, Joachim, Yao, Xiaotong, Yoon, Sung-Soo, Zamora, Jorge, Zhang, Cheng-Zhong

Funder: Ludwig Center at Harvard
Funder: National Cancer Institute: K22CA193848
Funder: US National Institutes of Health Intramural Research Program Project Z1AES103266
Chromothripsis is a mutational phenomenon characterized by massive

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5195ec456a7dddfe38cc52e2cafef35a

Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

Autor: Cortés-Ciriano, Isidro, Lee, Jake June Koo, Xi, Ruibin, Jain, Dhawal, Jung, Youngsook L., Yang, Lixing, Gordenin, Dmitry, Klimczak, Leszek J., Zhang, Cheng Zhong, Pellman, David S., Akdemir, Kadir C., Alvarez, Eva G., Baez-Ortega, Adrian, Beroukhim, Rameen, Boutros, Paul C., Bowtell, David D.L., Brors, Benedikt, Burns, Kathleen H., Campbell, Peter J., Chan, Kin, Chen, Ken, Dueso-Barroso, Ana, Dunford, Andrew J., Edwards, Paul A., Estivill, Xavier, Etemadmoghadam, Dariush, Feuerbach, Lars, Fink, J. Lynn, Frenkel-Morgenstern, Milana, Garsed, Dale W., Gerstein, Mark, Gordenin, Dmitry A., Haan, David, Haber, James E., Hess, Julian M., Hutter, Barbara, Imielinski, Marcin, Jones, David T.W., Ju, Young Seok, Kazanov, Marat D., Koh, Youngil, Korbel, Jan O., Kumar, Kiran, Lee, Eunjung Alice, Li, Yilong, Sidiropoulos, Nikos, Weischenfeldt, Joachim

Publikováno v: Nature Genetics, 52, 331-341
Nature Genetics, 52, 3, pp. 331-341
bioRxiv
Nature genetics, vol 52, iss 3
Cortés-Ciriano, I, Lee, J J K, Xi, R, Jain, D, Jung, Y L, Yang, L, Gordenin, D, Klimczak, L J, Zhang, C Z, Pellman, D S, Akdemir, K C, Alvarez, E G, Baez-Ortega, A, Beroukhim, R, Boutros, P C, Bowtell, D D L, Brors, B, Burns, K H, Campbell, P J, Chan, K, Chen, K, Cortés-Ciriano, I, Dueso-Barroso, A, Dunford, A J, Edwards, P A, Estivill, X, Etemadmoghadam, D, Feuerbach, L, Fink, J L, Frenkel-Morgenstern, M, Garsed, D W, Gerstein, M, Gordenin, D A, Haan, D, Haber, J E, Hess, J M, Hutter, B, Imielinski, M, Jones, D T W, Ju, Y S, Kazanov, M D, Klimczak, L J, Koh, Y, Korbel, J O, Kumar, K, Lee, E A, Lee, J J K, Li, Y, Sidiropoulos, N, Weischenfeldt, J, PCAWG Structural Variation Working Group & PCAWG Consortium 2020, ' Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing ', Nature Genetics . https://doi.org/10.1038/s41588-019-0576-7
Nature Genetics

Chromothripsis is a mutational phenomenon characterized by massive, clustered genomic rearrangements that occurs in cancer and other diseases. Recent studies in selected cancer types have suggested that chromothripsis may be more common than initiall

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a4bf4f61388ad5f4db646d27c51f1bd5
http://hdl.handle.net/2066/291219

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Enrichment of HP1a on Drosophila Chromosome 4 Genes Creates an Alternate Chromatin Structure Critical for Regulation in this Heterochromatic Domain.

Autor: Riddle, Nicole C.¹, Jung, Youngsook L.², Gu, Tingting¹, Alekseyenko, Artyom A.³, Asker, Dalal^4,5, Hongxing Gui⁴, Kharchenko, Peter V.², Minoda, Aki^6,7, Plachetka, Annette³, Schwartz, Yuri B.^4,8, Tolstorukov, Michael Y.², Kuroda, Mitzi I.³, Pirrotta, Vincenzo⁴, Karpen, Gary H.^6,7, Park, Peter J.² peter_park@hms.harvard.edu, Elgin, Sarah C. R.¹ riddlenc@biology2.wustl.edu

Publikováno v: PLoS Genetics. Sep2012, Vol. 8 Issue 9, Special section p1-20. 20p. 3 Diagrams, 6 Graphs.