Identification and Characterisation CRN Effectors in Phytophthora capsici Shows Modularity and Functional Diversity.

Autor: Remco Stam, Julietta Jupe, Andrew J M Howden, Jenny A Morris, Petra C Boevink, Pete E Hedley, Edgar Huitema

Publikováno v: PLoS ONE, Vol 8, Iss 3, p e59517 (2013)

Phytophthora species secrete a large array of effectors during infection of their host plants. The Crinkler (CRN) gene family encodes a ubiquitous but understudied class of effectors with possible but as of yet unknown roles in infection. To apprecia

Externí odkaz: https://doaj.org/article/1301d5780ddb4e60bfb7df2fd4bc9e37

Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons

Autor: Mingsheng Qi, Jeffrey C. Berry, Kira W. Veley, Lily O’Connor, Omri M. Finkel, Isai Salas-González, Molly Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina del Rio, Cody Creech, Peng Liu, Susannah G. Tringe, Jeffery L. Dangl, Daniel P. Schachtman, Rebecca S. Bart

Publikováno v: The ISME journal, vol 16, iss 8

Drought is a major abiotic stress limiting agricultural productivity. Previous field-level experiments have demonstrated that drought decreases microbiome diversity in the root and rhizosphere. How these changes ultimately affect plant health remains

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5d64d3949f72150ecf776192c1d8e0d
https://doi.org/10.1038/s41396-022-01245-4

Identification of beneficial and detrimental bacteria that impact sorghum responses to drought using multi-scale and multi-system microbiome comparisons

Autor: Mingsheng Qi, Jeffrey C. Berry, Kira Veley, Lily O’Connor, Omri M. Finkel, Isai Salas-González, Molly Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina del Rio, Cody Creech, Peng Liu, Susannah Tringe, Jeffery L. Dangl, Daniel Schachtman, Rebecca S. Bart

BackgroundDrought is a major abiotic stress that limits agricultural productivity. Previous field-level experiments have demonstrated that drought decreases microbiome diversity in the root and rhizosphere and may lead to enrichment of specific group

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::d323088ec0396af8f6d18eac3ea76b09
https://doi.org/10.1101/2021.04.13.437608

Massively parallel digital high resolution melt for rapid and absolutely quantitative sequence profiling

Autor: Ninad Kulkarni, Yang Zhang, Hannah Mack, Stephanie I. Fraley, Behnam Hedayatnia, Daniel Ortiz Velez, Hawker Sinead, Julietta Jupe, Shelley M. Lawrence

Publikováno v: Scientific reports, vol 7, iss 1
Scientific Reports
Velez, DO; Mack, H; Jupe, J; Hawker, S; Kulkarni, N; Hedayatnia, B; et al.(2017). Massively parallel digital high resolution melt for rapid and absolutely quantitative sequence profiling. SCIENTIFIC REPORTS, 7, 42326. doi: 10.1038/srep42326. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/8003x0sx

In clinical diagnostics and pathogen detection, profiling of complex samples for low-level genotypes represents a significant challenge. Advances in speed, sensitivity, and extent of multiplexing of molecular pathogen detection assays are needed to i

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ec6cb79ab3ae69e83db53048567b9821

Phytophthora capsici-tomato interaction features dramatic shifts in gene expression associated with a hemi-biotrophic lifestyle

Autor: Andrew J. M. Howden, Jenny Morris, Julietta Jupe, Remco Stam, Pete E. Hedley, Edgar Huitema, Runxuan Zhang

Publikováno v: Genome Biology

Background Plant-microbe interactions feature complex signal interplay between pathogens and their hosts. Phytophthora species comprise a destructive group of fungus-like plant pathogens, collectively affecting a wide range of plants important to agr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb984b72d2151a632cbdf2bac02ad520
https://doi.org/10.1186/gb-2013-14-6-r63