Zobrazeno 1 - 10
of 25
pro vyhledávání: '"Julie M Batten"'
Autor:
Long Phi Le, G Petur Nielsen, Andrew Eric Rosenberg, Dafydd Thomas, Julie M Batten, Vikram Deshpande, Joseph Schwab, Zhenfeng Duan, Ramnik J Xavier, Francis J Hornicek, A John Iafrate
Publikováno v:
PLoS ONE, Vol 6, Iss 5, p e18846 (2011)
The molecular events in chordoma pathogenesis have not been fully delineated, particularly with respect to copy number changes. Understanding copy number alterations in chordoma may reveal critical disease mechanisms that could be exploited for tumor
Externí odkaz:
https://doaj.org/article/bec8012c458f46d88c33bf8f78abf689
Autor:
Stuart J. Schnitt, Jorge S. Reis-Filho, A. John Iafrate, Matija Snuderl, Edi Brogi, Tarek Hammour, Xiaolong Liu, Song Lu, Kalliopi P. Siziopikou, Raymond S. Lim, Jonathan Serrano, Benjamin L. McCalip, Hwei-Choo Soh, Jonathan D. Marotti, Julie M. Batten, Andreas von Deimling, Kimberly S. Cole, Gabrielle M. Baker, Stefan Pusch, Jörg Balss, Achim A. Jungbluth, Charlotte K.Y. Ng, Salvatore Piscuoglio, Felipe C. Geyer, Anqi Li, Thais Basili, Kathleen A. Burke, Luciano G. Martelotto, Ashwini Raghavendra, Fresia Pareja, Huei-Chi Wen, Britta Weigelt, Sarah Chiang
Solid papillary carcinoma with reverse polarity (SPCRP) is a rare breast cancer subtype with an obscure etiology. In this study, we sought to describe its unique histopathologic features and to identify the genetic alterations that underpin SPCRP usi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3fcae40f4221628d7b924e03c887ee1f
https://doi.org/10.1158/0008-5472.c.6508527.v1
https://doi.org/10.1158/0008-5472.c.6508527.v1
Autor:
Stuart J. Schnitt, Jorge S. Reis-Filho, A. John Iafrate, Matija Snuderl, Edi Brogi, Tarek Hammour, Xiaolong Liu, Song Lu, Kalliopi P. Siziopikou, Raymond S. Lim, Jonathan Serrano, Benjamin L. McCalip, Hwei-Choo Soh, Jonathan D. Marotti, Julie M. Batten, Andreas von Deimling, Kimberly S. Cole, Gabrielle M. Baker, Stefan Pusch, Jörg Balss, Achim A. Jungbluth, Charlotte K.Y. Ng, Salvatore Piscuoglio, Felipe C. Geyer, Anqi Li, Thais Basili, Kathleen A. Burke, Luciano G. Martelotto, Ashwini Raghavendra, Fresia Pareja, Huei-Chi Wen, Britta Weigelt, Sarah Chiang
Document containing methods on whole exome and targeted massively parallel sequencing analysis, 2-hydroxyglutarate (2HG) assay of cell lines, methylation profiling, and supplementary references.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::34e26c450447f2bb69ac116231aa9b5a
https://doi.org/10.1158/0008-5472.22412823.v1
https://doi.org/10.1158/0008-5472.22412823.v1
Autor:
Stuart J. Schnitt, Jorge S. Reis-Filho, A. John Iafrate, Matija Snuderl, Edi Brogi, Tarek Hammour, Xiaolong Liu, Song Lu, Kalliopi P. Siziopikou, Raymond S. Lim, Jonathan Serrano, Benjamin L. McCalip, Hwei-Choo Soh, Jonathan D. Marotti, Julie M. Batten, Andreas von Deimling, Kimberly S. Cole, Gabrielle M. Baker, Stefan Pusch, Jörg Balss, Achim A. Jungbluth, Charlotte K.Y. Ng, Salvatore Piscuoglio, Felipe C. Geyer, Anqi Li, Thais Basili, Kathleen A. Burke, Luciano G. Martelotto, Ashwini Raghavendra, Fresia Pareja, Huei-Chi Wen, Britta Weigelt, Sarah Chiang
Document containing figures illustrating results of Sanger sequencing, DNA methylation profiling of SPCRPs, the analysis of IDH2 expression in non-malignant breast epithelial cells and its downstream effects, and tables describing the antibodies used
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::11c246c51be752c3be2aa96441b2da89
https://doi.org/10.1158/0008-5472.22412826
https://doi.org/10.1158/0008-5472.22412826
Autor:
Stuart J. Schnitt, Jorge S. Reis-Filho, A. John Iafrate, Matija Snuderl, Edi Brogi, Tarek Hammour, Xiaolong Liu, Song Lu, Kalliopi P. Siziopikou, Raymond S. Lim, Jonathan Serrano, Benjamin L. McCalip, Hwei-Choo Soh, Jonathan D. Marotti, Julie M. Batten, Andreas von Deimling, Kimberly S. Cole, Gabrielle M. Baker, Stefan Pusch, Jörg Balss, Achim A. Jungbluth, Charlotte K.Y. Ng, Salvatore Piscuoglio, Felipe C. Geyer, Anqi Li, Thais Basili, Kathleen A. Burke, Luciano G. Martelotto, Ashwini Raghavendra, Fresia Pareja, Huei-Chi Wen, Britta Weigelt, Sarah Chiang
Legends for Supplementary Figures S1-S5
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53c042e18fa24e1dfac924e425478e86
https://doi.org/10.1158/0008-5472.22412829
https://doi.org/10.1158/0008-5472.22412829
Autor:
Jochen K. Lennerz, Jacob E. Lemieux, Lauren L. Ritterhouse, Virginia M. Pierce, Julia Thierauf, Rebecca Pellerin, Sylvia Signorelli, Tasos Gogakos, Bennett M. Shaw, Graham McGrath, Christian T. Happi, Sarah E Turbett, Stephen F. Schaffner, Jacqueline S. Eversley, Damien Slater, Donald S. Grant, N Zeke Georgantas, Katherine J. Siddle, Jason B. Harris, Molly Kemball, Edward T. Ryan, Regina C. LaRocque, John A. Branda, Daouda Ndiaye, Hetal D. Marble, Pardis C. Sabeti, Julie M. Batten, Melis N. Anahtar, Elizabeth H Byrne, Samar B. Mehta, Eric S. Rosenberg, Gordon Adams, Yolanda Botti-Lodovico
Developing and deploying new diagnostic tests is difficult, but the need to do so in response to a rapidly emerging pandemic such as COVID-19 is crucially important for an effective response. In the early stages of a pandemic, laboratories play a key
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c53c48acb7ae92559f1b7a848b55d5ad
https://doi.org/10.1101/2020.08.26.20157297
https://doi.org/10.1101/2020.08.26.20157297
Autor:
Lauren L. Ritterhouse, Tyler E. Miller, Jared Feldman, John A. Branda, Sara E. Turbett, Edward T. Ryan, Grace K. Mahowald, Wilfredo F. Garcia Beltran, Eric S. Rosenberg, Jochen K. Lennerz, Galit Alter, David N. Louis, Blake M. Hauser, Melis N. Anahtar, Adam S. Fisch, Timothy M. Caradonna, Bradley E. Bernstein, Megan J. Fitzpatrick, Diane Yang, Anand S. Dighe, Virginia M. Pierce, Jeffrey A. Gelfand, Michael G Astudillo, Adam Z. Bard, Tasos Gogakos, Mandakolathur R. Murali, Julie M. Batten, Aaron G. Schmidt, Mark C. Poznansky, Richelle C. Charles, Nicholas Zeke Georgantas, Jason B. Harris, A. John Iafrate, Julia Thierauf, Hetal D. Marble, Valentina Nardi
Publikováno v:
The FASEB Journal
IntroductionThe diagnosis of COVID-19 requires integration of clinical and laboratory data. SARS-CoV-2 diagnostic assays play a central role in diagnosis and have fixed technical performance metrics. Interpretation becomes challenging because the cli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::11f98ba177b1bac0dcf1240b8357fc64
https://doi.org/10.1101/2020.06.19.20135723
https://doi.org/10.1101/2020.06.19.20135723
Autor:
Valentina Nardi, Miguel Rivera, Hayley Robinson, Florian J. Fintelmann, Jennifer S. Temel, Zofia Piotrowska, Mari Mino-Kenudson, Subba R. Digumarthy, Inga T. Lennes, A. John Iafrate, Jessica J. Lin, Jochen K. Lennerz, Dora Dias-Santagata, Meghan J. Mooradian, Christopher G Azzolli, Julie M. Batten, Lecia V. Sequist, Justin F. Gainor, Ginger Y. Jiang, Jo-Anne O. Shepard, Alice T. Shaw, Long P. Le, Martha B. Pitman, Ibiayi Dagogo-Jack, Anna F. Farago, Vania Nosé, Rebecca S. Heist
Publikováno v:
JCO Precision Oncology. :1-13
Purpose Targeted therapy is the cornerstone of treatment of advanced EGFR-mutant non–small-cell lung cancer (NSCLC). Next-generation sequencing (NGS), the preferred method for genotyping, typically requires several weeks. Here, we assessed workflow
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c1689ee3e892e6d3e9090b05d111f031
https://doi.org/10.1200/po.17.00299
https://doi.org/10.1200/po.17.00299
Autor:
Ashwini Raghavendra, Fresia Pareja, Anqi Li, Sarah Chiang, Jorge S. Reis-Filho, Raymond S. Lim, Charlotte K.Y. Ng, Andreas von Deimling, Jonathan D. Marotti, Kimberly Cole, Matija Snuderl, Thais Basili, Salvatore Piscuoglio, Huei Chi Wen, Stuart J. Schnitt, Felipe C Geyer, A. John Iafrate, Jörg Balss, Edi Brogi, Kalliopi P. Siziopikou, Hwei Choo Soh, Xiaolong Liu, Tarek Hammour, Gabrielle M. Baker, Song Lu, Luciano G. Martelotto, Achim A. Jungbluth, Jonathan Serrano, Kathleen A. Burke, Britta Weigelt, Julie M. Batten, Stefan Pusch, Benjamin L. McCalip
Publikováno v:
Cancer Research. 76:7118-7129
Solid papillary carcinoma with reverse polarity (SPCRP) is a rare breast cancer subtype with an obscure etiology. In this study, we sought to describe its unique histopathologic features and to identify the genetic alterations that underpin SPCRP usi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c1d26aaddc5a06a9a1d139a761d4ff9
https://doi.org/10.1158/0008-5472.can-16-0298
https://doi.org/10.1158/0008-5472.can-16-0298
Autor:
Enrique Dominguez Meneses, Allison MacLeay, Aymen Baig, Ryan P. Frazier, Ju Cheng, Priscilla K. Brastianos, Jochen K. Lennerz, Maciej Pacula, Krista Hu, Hayley Robinson, Jesse Lee, Julie M. Batten, Rebecca S. Heist, A. John Iafrate, Aditya Bardia, Long P. Le, Yi Cao
Publikováno v:
The Journal of molecular diagnostics : JMD. 21(4)
The use of liquid biopsies to identify driver mutations in patients with solid tumors holds great promise for performing targeted therapy selection, monitoring disease progression, and detecting treatment resistance mechanisms. We describe herein the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::de0b5a37409cec3af7c74adc0faf460f
https://pubmed.ncbi.nlm.nih.gov/31026600
https://pubmed.ncbi.nlm.nih.gov/31026600