Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Julian S. Gehring"'
Autor:
Eric J. Small, Lawrence Fong, Karen E. Knudsen, Brad Sickler, Robert E. Reiter, Charles J. Ryan, Theodore C. Goldstein, Tomasz M. Beer, Martin E. Gleave, Rahul Aggarwal, Julian S. Gehring, Rajdeep Das, John Shon, Scott M. Dehm, Alan Ashworth, David A. Quigley, Ha X. Dang, Terence W. Friedlander, R. Keira Cheetham, Denise Playdle, Paul Lloyd, Serafim Batzoglou, Jack F. Youngren, Jin Zhang, Nathan A. Lack, Adam Foye, Felix Y. Feng, Jörg Hakenberg, Adina M. Bailey, Owen N. Witte, Abhijit Parolia, Scott A. Tomlins, Travis J. Barnard, Donavan T. Cheng, Jiaoti Huang, Li Zhang, P. G. Febbo, Alexander W. Wyatt, Kim N. Chi, Matthew Rettig, Vishal Kothari, Daniel E. Spratt, Housheng Hansen He, Haolong Li, George Thomas, Arnold Liao, Shuang G. Zhao, Hui Li, Joshua M. Stuart, Won Kim, Primo N. Lara, Christopher G. Maher, Jonathan Chou, Joshi J. Alumkal, Amina Zoubeidi, Marc D. Perry, Ruhollah Moussavi-Baygi, Luke A. Gilbert, Arul M. Chinnaiyan, Christopher P. Evans, Hani Goodarzi, Marcin Cieslik, Kyle Kai-How Farh
Publikováno v:
Cell, vol 174, iss 3
Quigley, DA; Dang, HX; Zhao, SG; Lloyd, P; Aggarwal, R; Alumkal, JJ; et al.(2018). Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer. Cell, 174(3), 758-769.e9. doi: 10.1016/j.cell.2018.06.039. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/796124qb
Quigley, DA; Dang, HX; Zhao, SG; Lloyd, P; Aggarwal, R; Alumkal, JJ; et al.(2018). Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer. Cell, 174(3), 758-769.e9. doi: 10.1016/j.cell.2018.06.039. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/796124qb
© 2018 Elsevier Inc. While mutations affecting protein-coding regions have been examined across many cancers, structural variants at the genome-wide level are still poorly defined. Through integrative deep whole-genome and -transcriptome analysis of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1928a409b1341bcafb393804416865b5
https://escholarship.org/uc/item/796124qb
https://escholarship.org/uc/item/796124qb
Publikováno v:
Bioinformatics
Summary: Mutational signatures are patterns in the occurrence of somatic single-nucleotide variants that can reflect underlying mutational processes. The SomaticSignatures package provides flexible, interoperable and easy-to-use tools that identify s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0e120e6cedde1a6e2bf5534ec371eca
https://doi.org/10.1093/bioinformatics/btv408
https://doi.org/10.1093/bioinformatics/btv408
Publikováno v:
Bioinformatics
Summary: As applications of genome sequencing, including exomes and whole genomes, are expanding, there is a need for analysis tools that are scalable to large sets of samples and/or ultra-deep coverage. Many current tool chains are based on the wide
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1192b61cf741d92e6ed9727e2e0533e4
http://europepmc.org/articles/PMC4016699
http://europepmc.org/articles/PMC4016699
Mutational signatures are patterns in the occurrence of somatic single nucleotide variants (SNVs) that can reflect underlying mutational processes. The SomaticSignatures package provides flexible, interoperable, and easy-to-use tools that identify su
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d4648647ec235ea0498655978a27d9cf
Autor:
Julian S. Gehring, Vitaly Margulis, Connie Ha, Vanina Toffessi-Tcheuyap, Na Zhang, Ivan Pedrosa, Bernard Chow, Vasantharajan Janakiraman, Payal Kapur, Yair Lotan, Arthur I. Sagalowsky, Bijay S. Jaiswal, Steffen Durinck, Zora Modrusan, Jeremy Stinson, Subhra Chaudhuri, Celina Sanchez Rivers, Weiru Wang, Sadia Saleem, Sherry Heldens, Gregoire Pau, Marlena Jackson, Samuel Peña-Llopis, Lisa N. Kinch, Andrea Pavia-Jimenez, Peter M. Haverty, Thomas D. Wu, Joseph Guillory, Haley Hill, Eboni Holloman, Ying Jiun Chen, Corissa J. Harris, Somasekar Seshagiri, Thong T. Nguyen, Nick V. Grishin, Eric Stawiski, Jens Reeder, Frederic J. de Sauvage, Karen Toy, Kanika Bajaj Pahuja, James Brugarolas
Publikováno v:
Nature genetics. 47(1)
To further understand the molecular distinctions between kidney cancer subtypes, we analyzed exome, transcriptome and copy number alteration data from 167 primary human tumors that included renal oncocytomas and non-clear cell renal cell carcinomas (
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab6bf9e75bd01e5209d0cd470d0e1898
https://pubmed.ncbi.nlm.nih.gov/25447836
https://pubmed.ncbi.nlm.nih.gov/25447836
Autor:
Sonja Reiland, Jose M. Polo, Julian S. Gehring, Mahmoud-Reza Rafiee, Satoshi Okawa, Jeroen Krijgsveld, Konrad Hochedlinger, Jenny Hansson, Wolfgang Huber
Publikováno v:
Cell Reports, Vol 2, Iss 6, Pp 1579-1592 (2012)
Generation of induced pluripotent stem cells (iPSCs) is a process whose mechanistic underpinnings are only beginning to emerge. Here, we applied in-depth quantitative proteomics to monitor proteome changes during the course of reprogramming of fibrob
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::607b7be5c5a0b72dcda1e9715fbdfc4c
https://europepmc.org/articles/PMC4438680/
https://europepmc.org/articles/PMC4438680/
Publikováno v:
Bioinformatics. 28:1641-1642
Summary: High-throughput sequencing has become an essential experimental approach for the investigation of transcriptional mechanisms. For some applications like ChIP-seq, several approaches for the prediction of peak locations exist. However, these
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d09e784b6712775d32a57d02c7072f0f
https://doi.org/10.1093/bioinformatics/bts189
https://doi.org/10.1093/bioinformatics/bts189