Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Julian Catchen"'
Publikováno v:
Scientific Reports, Vol 13, Iss 1, Pp 1-15 (2023)
Abstract Mitochondrial genomes are known for their compact size and conserved gene order, however, recent studies employing long-read sequencing technologies have revealed the presence of atypical mitogenomes in some species. In this study, we assemb
Externí odkaz:
https://doaj.org/article/0ccc9e541c1a483cb4038f63886cd7bb
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 11, Pp 4115-4128 (2020)
The pace of the sequencing and computational assembly of novel reference genomes is accelerating. Though DNA sequencing technologies and assembly software tools continue to improve, biological features of genomes such as repetitive sequence as well a
Externí odkaz:
https://doaj.org/article/b3b1584268c649ff9d11c2686c1ef7e8
Autor:
Alida de Flamingh, Angel G. Rivera-Colón, Tom P. Gnoske, Julian C. Kerbis Peterhans, Julian Catchen, Ripan S. Malhi, Alfred L. Roca
Publikováno v:
Journal of Heredity. 114:120-130
Nuclear mitochondrial pseudogenes (numts) may hinder the reconstruction of mtDNA genomes and affect the reliability of mtDNA datasets for phylogenetic and population genetic comparisons. Here, we present the program Numt Parser, which allows for the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::efde0910e5f2e9c246f260deac65dbd5
https://doi.org/10.1093/jhered/esac065
https://doi.org/10.1093/jhered/esac065
Autor:
João Paulo Gomes Viana, Marcos Vinícius Bohrer Monteiro Siqueira, Fabiano Lucas Araujo, Carolina Grando, Patricia Sanae Sujii, Ellida de Aguiar Silvestre, Mariana Novello, José Baldin Pinheiro, Marcelo Mattos Cavallari, Pedro H S Brancalion, Ricardo Ribeiro Rodrigues, Anete Pereira de Souza, Julian Catchen, Maria I Zucchi
Publikováno v:
PLoS ONE, Vol 13, Iss 3, p e0192165 (2018)
The primary focus of tropical forest restoration has been the recovery of forest structure and tree taxonomic diversity, with limited attention given to genetic conservation. Populations reintroduced through restoration plantings may have low genetic
Externí odkaz:
https://doaj.org/article/14ce5eedef704a9ca35673bb4d55cae9
Autor:
Angel G, Rivera-Colón, Julian, Catchen
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2498
Restriction enzymes have been one of the primary tools in the population genetics toolkit for 50 years, being coupled with each new generation of technology to provide a more detailed view into the genetics of natural populations. Restriction site-As
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::3d66e88a1cb45e7fd502ee547c6e39a3
https://pubmed.ncbi.nlm.nih.gov/35727543
https://pubmed.ncbi.nlm.nih.gov/35727543
Autor:
Ian M. Traniello, Syed Abbas Bukhari, Payam Dibaeinia, Guillermo Serrano, Arian Avalos, Amy Cash Ahmed, Alison L. Sankey, Mikel Hernaez, Saurabh Sinha, Sihai Dave Zhao, Julian Catchen, Gene E. Robinson
Understanding how genotypic variation results in phenotypic variation, a major challenge in biology, is especially difficult for collective behaviour because collective group phenotypes arise from complex interactions between group members1. Honeybee
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::56e0f9f3a63506f95695c6c1b0b1c225
https://doi.org/10.1101/2022.03.29.486106
https://doi.org/10.1101/2022.03.29.486106
Autor:
José Cerca, Bent Petersen, José Miguel Lazaro Guevara, Angel Rivera-Colón, Siri Birkeland, Joel Vizueta, Siyu Li, João Loureiro, Chatchai Kosawang, Patricia Jaramillo Díaz, Gonzalo Rivas-Torres, Mario Fernández-Mazuecos, Pablo Vargas, Ross McCauley, Gitte Petersen, Luisa Santos-Bay, Nathan Wales, Julian Catchen, Daniel Machado, Michael D. Nowak, Alexander Suh, Neelima Sinha, Lene R. Nielsen, Ole Seberg, M. Thomas P. Gilbert, James H. Leebens-Mack, Loren Rieseberg, Michael D. Martin
Oceanic archipelagos comprise multiple disparate environments over small geographic areas and are isolated from other biotas. These conditions have led to some of the most spectacular adaptive radiations, which have been key to our understanding of e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1a66975934c0e68e7c781e241b57e66f
https://doi.org/10.1101/2022.01.26.477903
https://doi.org/10.1101/2022.01.26.477903
Autor:
Angel Rivera-Colón, Julian Catchen
Publikováno v:
Methods in Molecular Biology ISBN: 9781071623121
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0acd899d96d93c81cd7cce38f8d9eb55
https://doi.org/10.1007/978-1-0716-2313-8_7
https://doi.org/10.1007/978-1-0716-2313-8_7
Autor:
José Cerca, Marius Maurstad, Nicolas Rochette, Angel Rivera-Colón, Niraj Rayamajhi, Julian Catchen, Torsten Struck
The restriction site-associated DNA (RADseq) family of protocols involves digesting DNA and sequencing the region flanking the cut site, thus providing a cost and time efficient way for obtaining thousands of genomic markers. However, when working wi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::276b59f8639b050baf26624d16e50d17
https://ecoevorxiv.org/47tka
https://ecoevorxiv.org/47tka
Autor:
Shane C, Campbell-Staton, Kristin M, Winchell, Nicolas C, Rochette, Jason, Fredette, Inbar, Maayan, Rena M, Schweizer, Julian, Catchen
Publikováno v:
Nature ecologyevolution. 4(4)
Only recently have we begun to understand the ecological and evolutionary effects of urbanization on species, with studies revealing drastic impacts on community composition, gene flow, behaviour, morphology and physiology. However, our understanding
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::c6d9b86484e85bbb137618315818680a
https://pubmed.ncbi.nlm.nih.gov/32152530
https://pubmed.ncbi.nlm.nih.gov/32152530