Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Judhajeet Ray"'
Autor:
Supipi Liyamali Auwardt, Yeon-Jung Seo, Muslum Ilgu, Judhajeet Ray, Robert R. Feldges, Shambhavi Shubham, Lee Bendickson, Howard A. Levine, Marit Nilsen-Hamilton
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-10 (2018)
Abstract The relative ease of isolating aptamers with high specificity for target molecules suggests that molecular recognition may be common in the folds of natural RNAs. We show here that, when expressed in cells, aptamers can increase the intracel
Externí odkaz:
https://doaj.org/article/dfe7e4de04d0438488801b4f79c94ba4
Autor:
Drew T. Bergman, Thouis R. Jones, Vincent Liu, Judhajeet Ray, Evelyn Jagoda, Layla Siraj, Helen Y. Kang, Joseph Nasser, Michael Kane, Antonio Rios, Tung H. Nguyen, Sharon R. Grossman, Charles P. Fulco, Eric S. Lander, Jesse M. Engreitz
Publikováno v:
Nature
Gene regulation in the human genome is controlled by distal enhancers that activate specific nearby promoters(1). One model for this specificity is that promoters might have sequence-encoded preferences for certain enhancers, for example mediated by
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2cb3d3baa45e039ae2417a5316045a5d
https://europepmc.org/articles/PMC9262863/
https://europepmc.org/articles/PMC9262863/
Autor:
James J. Lewis, Paul R. Munn, Abdullah Ozer, Judhajeet Ray, Charles G. Danko, John T. Lis, Anniina Vihervaara
Heat shock (HS) initiates rapid, extensive, and evolutionarily conserved changes in transcription that are accompanied by chromatin decondensation and nucleosome loss at HS loci. Here we have employed in situ Hi-C to determine how heat stress affects
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c7c3f76e696c06cbd62ce0a95c826ad
https://europepmc.org/articles/PMC6765289/
https://europepmc.org/articles/PMC6765289/
Autor:
Ivan M. Geraskin, Judhajeet Ray, George A. Kraus, Marit Nilsen-Hamilton, Tianjiao Wang, Muslum Ilgu, Lee Bendickson
Publikováno v:
Methods. 98:26-33
The regulation of RNA transcription is central to cellular function. Changes in gene expression drive differentiation and cellular responses to events such as injury. RNA trafficking can also have a large impact on protein expression and its localiza
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::50e22c6a8ebec8e3e5f8854627845fbf
https://doi.org/10.1016/j.ymeth.2015.12.009
https://doi.org/10.1016/j.ymeth.2015.12.009
Autor:
Michelle Heck, Judhajeet Ray, Michael J. MacCoss, Richard J. Johnson, Abdullah Ozer, John T. Lis, Angela Kruse, Takuya Kajitani
Publikováno v:
Nucleic Acids Research
Specific genomic functions are dictated by macromolecular complexes (MCs) containing multiple proteins. Affinity purification of these complexes, often using antibodies, followed by mass spectrometry (MS) has revolutionized our ability to identify th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::92ec79fbdcdb8cf290b341007469ebf6
https://doi.org/10.1093/nar/gkaa542
https://doi.org/10.1093/nar/gkaa542
Autor:
John T. Lis, Warren R. Zipfel, Max Kushner, Juan Wang, Abdullah Ozer, Judhajeet Ray, Hening Lin
Publikováno v:
Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA,BRAIN,NTM,OMA,OMP).
Femto-Seq is a new nonlinear optical methodology that provides a means to determine the chromatin environment at the base-pair level at and around any site in the nucleus that can be identified by imaging.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1ab14bfb3cda1b743031031625a2875e
https://doi.org/10.1364/ntm.2019.ns2b.5
https://doi.org/10.1364/ntm.2019.ns2b.5
Autor:
Robert R. Feldges, Howard A. Levine, Yeon-Jung Seo, Lee Bendickson, Marit Nilsen-Hamilton, Muslum Ilgu, Shambhavi Shubham, Judhajeet Ray, Supipi Liyamali Auwardt
Publikováno v:
Scientific Reports
Scientific Reports, Vol 8, Iss 1, Pp 1-10 (2018)
Scientific Reports, Vol 8, Iss 1, Pp 1-10 (2018)
The relative ease of isolating aptamers with high specificity for target molecules suggests that molecular recognition may be common in the folds of natural RNAs. We show here that, when expressed in cells, aptamers can increase the intracellular con
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5525f8f73617252ebfdf9b6af7b2b349
http://europepmc.org/articles/PMC6200808
http://europepmc.org/articles/PMC6200808
Publikováno v:
Biophysical Journal. 114:255a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2c31781811f347836f18ef48bc148cb5
https://doi.org/10.1016/j.bpj.2017.11.1416
https://doi.org/10.1016/j.bpj.2017.11.1416
Autor:
Muslum Ilgu, Ilchung Shin, George A. Kraus, Judhajeet Ray, Lee Bendickson, Vinayak Gupta, Marit Nilsen-Hamilton
Cell communications are essential to the organization, development, and maintenance of multicellular organisms. Much of this communication involves changes in RNA transcription and is dynamic. Most methods for studying transcription require interrupt
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::39359d4ab5b12636f2797d7c9503a96d
https://doi.org/10.1016/bs.mie.2016.02.028
https://doi.org/10.1016/bs.mie.2016.02.028