Zobrazeno 1 - 10
of 115
pro vyhledávání: '"Joshua Z. Levin"'
Autor:
Philipp Janssen, Zane Kliesmete, Beate Vieth, Xian Adiconis, Sean Simmons, Jamie Marshall, Cristin McCabe, Holger Heyn, Joshua Z. Levin, Wolfgang Enard, Ines Hellmann
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-22 (2023)
Abstract Background In droplet-based single-cell and single-nucleus RNA-seq experiments, not all reads associated with one cell barcode originate from the encapsulated cell. Such background noise is attributed to spillage from cell-free ambient RNA o
Externí odkaz:
https://doaj.org/article/aa9dde6a34444a78b997de85197d101b
Autor:
Matan Sorek, Walaa Oweis, Malka Nissim-Rafinia, Moria Maman, Shahar Simon, Cynthia C. Hession, Xian Adiconis, Sean K. Simmons, Neville E. Sanjana, Xi Shi, Congyi Lu, Jen Q. Pan, Xiaohong Xu, Mahmoud A. Pouladi, Lisa M. Ellerby, Feng Zhang, Joshua Z. Levin, Eran Meshorer
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-25 (2021)
Abstract Background Many neurodegenerative diseases develop only later in life, when cells in the nervous system lose their structure or function. In many forms of neurodegenerative diseases, this late-onset phenomenon remains largely unexplained. Re
Externí odkaz:
https://doaj.org/article/ef6b9f08c22b4b3bb7ae4a84695c552b
Autor:
Christina A. Cuomo, Guus Bakkeren, Hala Badr Khalil, Vinay Panwar, David Joly, Rob Linning, Sharadha Sakthikumar, Xiao Song, Xian Adiconis, Lin Fan, Jonathan M. Goldberg, Joshua Z. Levin, Sarah Young, Qiandong Zeng, Yehoshua Anikster, Myron Bruce, Meinan Wang, Chuntao Yin, Brent McCallum, Les J. Szabo, Scot Hulbert, Xianming Chen, John P. Fellers
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 7, Iss 2, Pp 361-376 (2017)
Three members of the Puccinia genus, Puccinia triticina (Pt), P. striiformis f.sp. tritici (Pst), and P. graminis f.sp. tritici (Pgt), cause the most common and often most significant foliar diseases of wheat. While similar in biology and life cycle,
Externí odkaz:
https://doaj.org/article/fda08af4726241d5af73842653f51f55
Autor:
Liang Ma, Zehua Chen, Da Wei Huang, Geetha Kutty, Mayumi Ishihara, Honghui Wang, Amr Abouelleil, Lisa Bishop, Emma Davey, Rebecca Deng, Xilong Deng, Lin Fan, Giovanna Fantoni, Michael Fitzgerald, Emile Gogineni, Jonathan M. Goldberg, Grace Handley, Xiaojun Hu, Charles Huber, Xiaoli Jiao, Kristine Jones, Joshua Z. Levin, Yueqin Liu, Pendexter Macdonald, Alexandre Melnikov, Castle Raley, Monica Sassi, Brad T. Sherman, Xiaohong Song, Sean Sykes, Bao Tran, Laura Walsh, Yun Xia, Jun Yang, Sarah Young, Qiandong Zeng, Xin Zheng, Robert Stephens, Chad Nusbaum, Bruce W. Birren, Parastoo Azadi, Richard A. Lempicki, Christina A. Cuomo, Joseph A. Kovacs
Publikováno v:
Nature Communications, Vol 7, Iss 1, Pp 1-14 (2016)
Pneumocystis jirovecii is a fungus that can cause life-threatening pneumonia in immunocompromised patients. Here, the authors sequence the genomes of P. jirovecii and two other Pneumocystisspecies, and show the unexpected absence of chitin (a near un
Externí odkaz:
https://doaj.org/article/a63cc72f702b47298d73bf4e878df92d
Autor:
Methodios Ximerakis, Kristina M. Holton, Richard M. Giadone, Ceren Ozek, Monika Saxena, Samara Santiago, Xian Adiconis, Danielle Dionne, Lan Nguyen, Kavya M. Shah, Jill M. Goldstein, Caterina Gasperini, Ioannis A. Gampierakis, Scott L. Lipnick, Sean K. Simmons, Sean M. Buchanan, Amy J. Wagers, Aviv Regev, Joshua Z. Levin, Lee L. Rubin
Publikováno v:
Nature Aging. 3:327-345
Aging is a complex process involving transcriptomic changes associated with deterioration across multiple tissues and organs, including the brain. Recent studies using heterochronic parabiosis have shown that various aspects of aging-associated decli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8657f8805441eff3eb51264f9415b9f0
https://doi.org/10.1038/s43587-023-00373-6
https://doi.org/10.1038/s43587-023-00373-6
Autor:
Jeffrey A. Stogsdill, Kwanho Kim, Loïc Binan, Samouil L. Farhi, Joshua Z. Levin, Paola Arlotta
Publikováno v:
Nature. 608:750-756
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d61aaca63aa2537ca0dbbc462f26697b
https://doi.org/10.1038/s41586-022-05056-7
https://doi.org/10.1038/s41586-022-05056-7
Autor:
Kaitlin R. Carroll, Mark Mizrachi, Sean Simmons, Bahtiyar Toz, Jeffrey Wingard, Nazila Tehrani, Aida Zarfeshani, Nina Kello, Czeslawa Kowal, Joshua Z. Levin, Bruce T. Volpe, Betty Diamond
Cognitive impairment is a frequent manifestation of neuropsychiatric systemic lupus erythematosus (NPSLE), present in up to 80% of patients and leading to a diminished quality of life. We have developed a model of lupus-like cognitive impairment whic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::01460af5b523abb56e1c2b5f7cbaad02
https://doi.org/10.1101/2023.05.01.538935
https://doi.org/10.1101/2023.05.01.538935
Autor:
Bruna Paulsen, Silvia Velasco, Amanda J. Kedaigle, Martina Pigoni, Giorgia Quadrato, Anthony J. Deo, Xian Adiconis, Ana Uzquiano, Rafaela Sartore, Sung Min Yang, Sean K. Simmons, Panagiotis Symvoulidis, Kwanho Kim, Kalliopi Tsafou, Archana Podury, Catherine Abbate, Ashley Tucewicz, Samantha N. Smith, Alexandre Albanese, Lindy Barrett, Neville E. Sanjana, Xi Shi, Kwanghun Chung, Kasper Lage, Edward S. Boyden, Aviv Regev, Joshua Z. Levin, Paola Arlotta
Publikováno v:
Nature. 602:268-273
Genetic risk for autism spectrum disorder (ASD) is associated with hundreds of genes spanning a wide range of biological functions
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2bd53e57f536ce5e648278370de37b1d
https://doi.org/10.1038/s41586-021-04358-6
https://doi.org/10.1038/s41586-021-04358-6
Autor:
Zohreh Farsi, Ally Nicolella, Sean K. Simmons, Sameer Aryal, Nate Shepard, Kira Brenner, Sherry Lin, Linnea Herzog, Wangyong Shin, Vahid Gazestani, Bryan Song, Kevin Bonanno, Hasmik Keshishian, Steven A. Carr, Evan Macosko, Sandeep Datta, Borislav Dejanovic, Eunjoon Kim, Joshua Z. Levin, Morgan Sheng
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::66b39ac0e3e8f874d530b13f1e86b50f
https://doi.org/10.2139/ssrn.4309117
https://doi.org/10.2139/ssrn.4309117
Autor:
Philipp Janssen, Zane Kliesmete, Beate Vieth, Xian Adiconis, Sean Simmons, Jamie Marshall, Cristin McCabe, Holger Heyn, Joshua Z. Levin, Wolfgang Enard, Ines Hellmann
BACKGROUNDIn droplet-based single-cell and single-nucleus RNA-seq experiments, not all reads associated with one cell barcode originate from the encapsulated cell. Such background noise is attributed to spillage from cell-free ambient RNA or barcode
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4faabda1deb70374425ab3797934d2b8
https://doi.org/10.1101/2022.11.16.516780
https://doi.org/10.1101/2022.11.16.516780