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pro vyhledávání: '"Joshua Rest"'
Nicotinic acetylcholine receptors (nAChRs) play a pivotal role in the nervous system, and there is great interest in understanding their evolution. Cnidarians, an ancestral group of metazoans, display an early nervous system utilizing complex neural
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::493c577e2092ea8d598c24ff270fa52d
https://doi.org/10.21203/rs.3.rs-195699/v1
https://doi.org/10.21203/rs.3.rs-195699/v1
Autor:
Mariana Rius, Joshua Rest
The purpose of this protocol is to evaluate the significance of delta G values, as a strategy to determine the significance of secondary structure. Sequences are shuffled randomly 100x, maintaining base composition but not base order. The percentile
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7337ba6195d22f7fdb4dc92b8b01e346
https://doi.org/10.17504/protocols.io.h9mb946
https://doi.org/10.17504/protocols.io.h9mb946
Autor:
Mariana Rius, not provided Joshua Rest
Bioinformatic approach to identifying over-represented motifs in the region framing the start codon (25 bp up and downstream) for genes annotated in the three sequenced Labyrinthulomycete genomes (Aurantiochytrium limacinum, Schizochytrium aggregatum
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ed1c13b58e2c113cd79c4a2fdb27948a
https://doi.org/10.17504/protocols.io.hikb4cw
https://doi.org/10.17504/protocols.io.hikb4cw
We analyzed the recently available whole genome sequences from two thraustochytrids (Aurantiochytrium limacinum ATCC MYA-1381, Schizochytrium aggregatum ATCC 28209) and one aplanochytrid (Aplanochytrium PBS07) We then calculated the genome-wide relat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6345b0d63effca4a6381965f9fa102e5
https://doi.org/10.17504/protocols.io.hgyb3xw
https://doi.org/10.17504/protocols.io.hgyb3xw
To develop broadly useful methods for the genetic manipulation of Labyrinthulomycetes, it is essential to understand the similarities and differences in regulation of gene expression among them. Toward this end we have used FIMO from the MEME suite (
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::10ceaed0fabb9aa2e0a0feee196b84c9
https://doi.org/10.17504/protocols.io.hg8b3zw
https://doi.org/10.17504/protocols.io.hg8b3zw