Zobrazeno 1 - 10
of 41
pro vyhledávání: '"Joshua R. Herr"'
Autor:
Ema H. Graham, Wesley A. Tom, Alison C. Neujahr, Michael S. Adamowicz, Jennifer L. Clarke, Joshua R. Herr, Samodha C. Fernando
Publikováno v:
Virology Journal, Vol 20, Iss 1, Pp 1-16 (2023)
Abstract Background The human skin contains a diverse microbiome that provides protective functions against environmental pathogens. Studies have demonstrated that bacteriophages modulate bacterial community composition and facilitate the transfer of
Externí odkaz:
https://doaj.org/article/ac3c00051f604814bfe8a8219b8f8330
Autor:
Ashley Stengel, Rhae A. Drijber, Erin Carr, Thais Egreja, Edward Hillman, Timothy Krause, Samantha Reese, Joshua R. Herr
Publikováno v:
Phytobiomes Journal, Vol 6, Iss 2, Pp 108-117 (2022)
Systems of classification are important for guiding research activities and providing a common platform for discussion and investigation. One such system is assigning microbial taxa to the roles of mutualists and pathogens. However, there are often c
Externí odkaz:
https://doaj.org/article/16d06db0d40941fe99902a9ed8aa5828
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
Species concepts have long provided a source of debate among biologists. These lively debates have been important for reaching consensus on how to communicate across scientific disciplines and for advancing innovative strategies to study evolution, p
Externí odkaz:
https://doaj.org/article/103e019099cc4f50a4d4acc5f95dd847
Autor:
Rachel A. Koch, Joshua R. Herr
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
Armillaria is a globally distributed fungal genus most notably composed of economically important plant pathogens that are found predominantly in forest and agronomic systems. The genus sensu lato has more recently received attention for its role in
Externí odkaz:
https://doaj.org/article/121ce08db11f4b79a720d4d84885ffac
Autor:
Rachel A. Koch, Joshua R. Herr
Publikováno v:
mSystems, Vol 6, Iss 5 (2021)
ABSTRACT During mycoparasitism, a fungus—the host—is parasitized by another fungus—the mycoparasite. The genetic underpinnings of these relationships have been best characterized in ascomycete fungi. However, within basidiomycete fungi, there a
Externí odkaz:
https://doaj.org/article/59f314d318334ffe94f8f29060d9a330
Autor:
Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad, Elmar Boucher, Adam Caldwell, Reed Cartwright, Amanda Charbonneau, Bede Constantinides, Greg Edvenson, Scott Fay, Jacob Fenton, Thomas Fenzl, Jordan Fish, Leonor Garcia-Gutierrez, Phillip Garland, Jonathan Gluck, Iván González, Sarah Guermond, Jiarong Guo, Aditi Gupta, Joshua R. Herr, Adina Howe, Alex Hyer, Andreas Härpfer, Luiz Irber, Rhys Kidd, David Lin, Justin Lippi, Tamer Mansour, Pamela McA'Nulty, Eric McDonald, Jessica Mizzi, Kevin D. Murray, Joshua R. Nahum, Kaben Nanlohy, Alexander Johan Nederbragt, Humberto Ortiz-Zuazaga, Jeramia Ory, Jason Pell, Charles Pepe-Ranney, Zachary N. Russ, Erich Schwarz, Camille Scott, Josiah Seaman, Scott Sievert, Jared Simpson, Connor T. Skennerton, James Spencer, Ramakrishnan Srinivasan, Daniel Standage, James A. Stapleton, Susan R. Steinman, Joe Stein, Benjamin Taylor, Will Trimble, Heather L. Wiencko, Michael Wright, Brian Wyss, Qingpeng Zhang, en zyme, C. Titus Brown
Publikováno v:
F1000Research, Vol 4 (2015)
The khmer package is a freely available software library for working efficiently with fixed length DNA words, or k-mers. khmer provides implementations of a probabilistic k-mer counting data structure, a compressible De Bruijn graph representation, D
Externí odkaz:
https://doaj.org/article/dc774924b98d40d0bd7efc6c2c5b346c
Publikováno v:
Biotechnology Journal International. :16-28
Promoters play critical roles in controlling the transcription of genes and are important as tools to drive heterologous expression for biotechnological applications. In addition to core transcription factor-binding motifs that assist in the binding
Autor:
Ema H. Graham, Michael S. Adamowicz, Peter C. Angeletti, Jennifer L. Clarke, Samodha C. Fernando, Joshua R. Herr
Publikováno v:
Microbiology Resource Announcements. 11
A feline papillomavirus genome was assembled from metagenomic sequencing data collected from the skin of a house cat owner. The circular genome of strain P20 is 8,069 bp in length, has a GC content of 54.38%, and displays genome organization typical
Autor:
Michael A Meier, Gen Xu, Martha G Lopez-Guerrero, Guangyong Li, Christine Smith, Brandi Sigmon, Joshua R Herr, James R Alfano, Yufeng Ge, James C Schnable, Jinliang Yang
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7fea0138eaa4259863ce35ad9c7e009f
https://doi.org/10.7554/elife.75790.sa2
https://doi.org/10.7554/elife.75790.sa2
Autor:
Ema H. Graham, Michael S. Adamowicz, Peter C. Angeletti, Jennifer L. Clarke, Samodha C. Fernando, Joshua R. Herr
The human skin is our point of contact with the microbial world, yet little is known about the diversity of the skin virome. Studies of the human skin virome have focused on bacteriophage and double-stranded DNA viral genomes, however, there have bee
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9a824f17e8d0eefe6c5319f4d4ba34ae
https://doi.org/10.1101/2022.05.22.492996
https://doi.org/10.1101/2022.05.22.492996