Zobrazeno 1 - 10
of 202
pro vyhledávání: '"Joseph W. Spatafora"'
Autor:
Jeffrey J. Czajka, Yichao Han, Joonhoon Kim, Stephen J. Mondo, Beth A. Hofstad, AnaLaura Robles, Sajeet Haridas, Robert Riley, Kurt LaButti, Jasmyn Pangilinan, William Andreopoulos, Anna Lipzen, Juying Yan, Mei Wang, Vivian Ng, Igor V. Grigoriev, Joseph W. Spatafora, Jon K. Magnuson, Scott E. Baker, Kyle R. Pomraning
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 12 (2024)
The Lipomyces clade contains oleaginous yeast species with advantageous metabolic features for biochemical and biofuel production. Limited knowledge about the metabolic networks of the species and limited tools for genetic engineering have led to a r
Externí odkaz:
https://doaj.org/article/e4235ff99f1948b58b602ca0631e234b
Autor:
Lluvia Vargas-Gastélum, Alexander S. Romer, Marjan Ghotbi, Jason W. Dallas, N. Reed Alexander, Kylie C. Moe, Kerry L. McPhail, George F. Neuhaus, Leila Shadmani, Joseph W. Spatafora, Jason E. Stajich, Javier F. Tabima, Donald M. Walker
Publikováno v:
mSphere, Vol 9, Iss 3 (2024)
ABSTRACTReptiles and amphibians (herptiles) are some of the most endangered and threatened species on the planet and numerous conservation strategies are being implemented with the goal of ensuring species recovery. Little is known, however, about th
Externí odkaz:
https://doaj.org/article/726c665e435a4079977ab6b796dc918b
Autor:
Ole Christian Hagestad, Lingwei Hou, Jeanette H. Andersen, Espen H. Hansen, Bjørn Altermark, Chun Li, Eric Kuhnert, Russell J. Cox, Pedro W. Crous, Joseph W. Spatafora, Kathleen Lail, Mojgan Amirebrahimi, Anna Lipzen, Jasmyn Pangilinan, William Andreopoulos, Richard D. Hayes, Vivian Ng, Igor V. Grigoriev, Stephen A. Jackson, Thomas D. S. Sutton, Alan D. W. Dobson, Teppo Rämä
Publikováno v:
IMA Fungus, Vol 12, Iss 1, Pp 1-23 (2021)
ABSTRACT Marine fungi remain poorly covered in global genome sequencing campaigns; the 1000 fungal genomes (1KFG) project attempts to shed light on the diversity, ecology and potential industrial use of overlooked and poorly resolved fungal taxa. Thi
Externí odkaz:
https://doaj.org/article/2d4678d8f908489583a2e1a111df6ec7
Autor:
Andrii P. Gryganskyi, Jacob Golan, Anna Muszewska, Alexander Idnurm, Somayeh Dolatabadi, Stephen J. Mondo, Vira B. Kutovenko, Volodymyr O. Kutovenko, Michael T. Gajdeczka, Iryna M. Anishchenko, Julia Pawlowska, Ngoc Vinh Tran, Ingo Ebersberger, Kerstin Voigt, Yan Wang, Ying Chang, Teresa E. Pawlowska, Joseph Heitman, Rytas Vilgalys, Gregory Bonito, Gerald L. Benny, Matthew E. Smith, Nicole Reynolds, Timothy Y. James, Igor V. Grigoriev, Joseph W. Spatafora, Jason E. Stajich
Publikováno v:
Microorganisms, Vol 11, Iss 7, p 1830 (2023)
The first genome sequenced of a eukaryotic organism was for Saccharomyces cerevisiae, as reported in 1996, but it was more than 10 years before any of the zygomycete fungi, which are the early-diverging terrestrial fungi currently placed in the phyla
Externí odkaz:
https://doaj.org/article/bb533bbe2f6440d791098ed3072dfced
Autor:
Ying Chang, D’Ann Rochon, Satoshi Sekimoto, Yan Wang, Mansi Chovatia, Laura Sandor, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)
Abstract The zoosporic obligate endoparasites, Olpidium, hold a pivotal position to the reconstruction of the flagellum loss in fungi, one of the key morphological transitions associated with the colonization of land by the early fungi. We generated
Externí odkaz:
https://doaj.org/article/43da8aae83df4773810b0787d298573f
Autor:
Shingo Miyauchi, Enikő Kiss, Alan Kuo, Elodie Drula, Annegret Kohler, Marisol Sánchez-García, Emmanuelle Morin, Bill Andreopoulos, Kerrie W. Barry, Gregory Bonito, Marc Buée, Akiko Carver, Cindy Chen, Nicolas Cichocki, Alicia Clum, David Culley, Pedro W. Crous, Laure Fauchery, Mariangela Girlanda, Richard D. Hayes, Zsófia Kéri, Kurt LaButti, Anna Lipzen, Vincent Lombard, Jon Magnuson, François Maillard, Claude Murat, Matt Nolan, Robin A. Ohm, Jasmyn Pangilinan, Maíra de Freitas Pereira, Silvia Perotto, Martina Peter, Stephanie Pfister, Robert Riley, Yaron Sitrit, J. Benjamin Stielow, Gergely Szöllősi, Lucia Žifčáková, Martina Štursová, Joseph W. Spatafora, Leho Tedersoo, Lu-Min Vaario, Akiyoshi Yamada, Mi Yan, Pengfei Wang, Jianping Xu, Tom Bruns, Petr Baldrian, Rytas Vilgalys, Christophe Dunand, Bernard Henrissat, Igor V. Grigoriev, David Hibbett, László G. Nagy, Francis M. Martin
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-17 (2020)
Mycorrhizal symbioses have evolved repeatedly in diverse fungal lineages. A large phylogenomic analysis sheds light on genomic changes associated with transitions from saprotrophy to symbiosis, including divergent genetic innovations underlying the c
Externí odkaz:
https://doaj.org/article/3b590b5be4d447b18b8a203b8982f8ac
Autor:
Javier F. Tabima, Ian A. Trautman, Ying Chang, Yan Wang, Stephen Mondo, Alan Kuo, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 9, Pp 3417-3433 (2020)
Research into secondary metabolism (SM) production by fungi has resulted in the discovery of diverse, biologically active compounds with significant medicinal applications. The fungi rich in SM production are taxonomically concentrated in the subking
Externí odkaz:
https://doaj.org/article/58741d9460af4e0e8c0ab6e56f7c38fa
Autor:
Rodrigo A. Olarte, Jon Menke, Ying Zhang, Shawn Sullivan, Jason C. Slot, Yinyin Huang, Jonathan P. Badalamenti, Alisha C. Quandt, Joseph W. Spatafora, Kathryn E. Bushley
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-23 (2019)
Abstract Background Genes involved in production of secondary metabolites (SMs) in fungi are exceptionally diverse. Even strains of the same species may exhibit differences in metabolite production, a finding that has important implications for drug
Externí odkaz:
https://doaj.org/article/9bb8d18fa51a4344a158664173287c91
Autor:
David S. Hibbett, Meredith Blackwell, Timothy Y. James, Joseph W. Spatafora, John W. Taylor, Rytas Vilgalys
Publikováno v:
IMA Fungus, Vol 9, Iss 2, Pp 291-298 (2018)
Abstract Phylogenetic taxon definitions (PTDs) are explicit, phylogeny-based statements that specify clades. PTDs are central to the system of rank-free classification that is governed by the PhyloCode, but they can also be used to clarify the meanin
Externí odkaz:
https://doaj.org/article/806bc574d315468f90c13c940abfa78d
Autor:
Dániel G. Knapp, Julianna B. Németh, Kerrie Barry, Matthieu Hainaut, Bernard Henrissat, Jenifer Johnson, Alan Kuo, Joanne Hui Ping Lim, Anna Lipzen, Matt Nolan, Robin A. Ohm, László Tamás, Igor V. Grigoriev, Joseph W. Spatafora, László G. Nagy, Gábor M. Kovács
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-13 (2018)
Abstract Dark septate endophytes (DSE) are a form-group of root endophytic fungi with elusive functions. Here, the genomes of two common DSE of semiarid areas, Cadophora sp. and Periconia macrospinosa were sequenced and analyzed with another 32 ascom
Externí odkaz:
https://doaj.org/article/e4ef080f84db41c5baa1fda4e96573be