Zobrazeno 1 - 10
of 126
pro vyhledávání: '"Joseph Felsenstein"'
Publikováno v:
Systematic Biology, 68 (5)
Systematic Biology
Systematic Biology
Stochastic birth–death models provide the foundation for studying and simulating evolutionary trees in phylodynamics. A curious feature of such models is that they exhibit fundamental symmetries when the birth and death rates are interchanged. In t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::91183087bebbdf8e04b54ab8d5543aeb
Autor:
Joseph Felsenstein, Alexandros Stamatakis, Barbara L. Banbury, Adrián Nieto-Montes de Oca, Adam D. Leaché
Publikováno v:
Systematic Biology
Single nucleotide polymorphisms (SNPs) are useful markers for phylogenetic studies owing in part to their ubiquity throughout the genome and ease of collection. Restriction site associated DNA sequencing (RADseq) methods are becoming increasingly pop
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::32d3a1e13796afe07cf21f7c053637c6
https://doi.org/10.1093/sysbio/syv053
https://doi.org/10.1093/sysbio/syv053
Autor:
Joseph Felsenstein
Publikováno v:
The Biological bulletin. 196(3)
When phylogenies get down below the species level, they turn into coalescents. Individual genetic loci then have genealogies that are, in the absence of recombination, trees. But as one moves along the genome, recombination moves branches and changes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8ccc2ce61662500709b8b57739379d75
https://pubmed.ncbi.nlm.nih.gov/28296486
https://pubmed.ncbi.nlm.nih.gov/28296486
Autor:
Remco R. Bouckaert, David Bryant, Arindam RoyChoudhury, Noah A. Rosenberg, Joseph Felsenstein
Publikováno v:
Molecular Biology and Evolution. 29:1917-1932
The multi-species coalescent provides an elegant theoretical framework for estimating species trees and species demographics from genetic markers. Practical applications of the multi-species coalescent model are, however, limited by the need to integ
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::80e048d0dddf277ee1030d2c9336c037
https://doi.org/10.1093/molbev/mss086
https://doi.org/10.1093/molbev/mss086
Publikováno v:
Philosophical Transactions of the Royal Society B: Biological Sciences. 366:1410-1424
How do we quantify patterns (such as responses to local selection) sampled across multiple populations within a single species? Key to this question is the extent to which populations within species represent statistically independent data points in
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dbd0b8ecbbc0298d9504ff04140f40c7
https://doi.org/10.1098/rstb.2010.0311
https://doi.org/10.1098/rstb.2010.0311
Publikováno v:
Genetics. 180:1095-1105
We have developed a pruning algorithm for likelihood estimation of a tree of populations. This algorithm enables us to compute the likelihood for large trees. Thus, it gives an efficient way of obtaining the maximum-likelihood estimate (MLE) for a gi
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1423b251778ac6845228f8ec2a40cb70
https://doi.org/10.1534/genetics.107.085753
https://doi.org/10.1534/genetics.107.085753
Autor:
Joseph Felsenstein
Publikováno v:
The American Naturalist. 171:713-725
Comparative methods analyses have usually assumed that the species phenotypes are the true means for those species. In most analyses, the actual values used are means of samples of modest size. The covariances of contrasts then involve both the covar
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c0b5654d57f35f0debdc5c8beb9440b5
https://doi.org/10.1086/587525
https://doi.org/10.1086/587525
Autor:
Joseph Felsenstein
Publikováno v:
Molecular Biology and Evolution. 23:691-700
A computer simulation study has been made of the accuracy of estimates of Theta = 4Nemu from a sample from a single isolated population of finite size. The accuracies turn out to be well predicted by a formula developed by Fu and Li, who used optimis
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https://explore.openaire.eu/search/publication?articleId=doi_dedup___::67820419e12bcf4cedc379e8ff002c40
https://doi.org/10.1093/molbev/msj079
https://doi.org/10.1093/molbev/msj079
Autor:
Joseph Felsenstein
The NATO Advanced Study Institute on Numerical Taxonomy took place on the 4th - 16th of July, 1982, at the Kur- und Kongresshotel Residenz in Bad Windsheim, Federal Republic of Germany. This volume is the proceedings of that meeting, and contains pap