Zobrazeno 1 - 10
of 74
pro vyhledávání: '"Joseph E Peters"'
Autor:
Henk C den Bakker, Christopher A Desjardins, Allison D Griggs, Joseph E Peters, Qiandong Zeng, Sarah K Young, Chinnappa D Kodira, Chandri Yandava, Theresa A Hepburn, Brian J Haas, Bruce W Birren, Martin Wiedmann
Publikováno v:
PLoS ONE, Vol 8, Iss 6, p e67511 (2013)
Listeria monocytogenes, a foodborne bacterial pathogen, is comprised of four phylogenetic lineages that vary with regard to their serotypes and distribution among sources. In order to characterize lineage-specific genomic diversity within L. monocyto
Externí odkaz:
https://doaj.org/article/28449aa3046e4204ad82a9b55793e257
Autor:
Andrea I Moreno Switt, Henk C den Bakker, Craig A Cummings, Lorraine D Rodriguez-Rivera, Gregory Govoni, Matthew L Raneiri, Lovorka Degoricija, Stephanie Brown, Karin Hoelzer, Joseph E Peters, Elena Bolchacova, Manohar R Furtado, Martin Wiedmann
Publikováno v:
PLoS ONE, Vol 7, Iss 7, p e41247 (2012)
The genetic diversity represented by >2,500 different Salmonella serovars provides a yet largely uncharacterized reservoir of mobile elements that can contribute to the frequent emergence of new pathogenic strains of this important zoonotic pathogen.
Externí odkaz:
https://doaj.org/article/44999c168c3245098fdaa276a603e8a9
Autor:
Sergey A. Shmakov, Zachary K. Barth, Kira S. Makarova, Yuri I. Wolf, Vyacheslav Brover, Joseph E. Peters, Eugene V. Koonin
CRISPR-casloci typically contain CRISPR arrays with unique spacers separating direct repeats. Spacers along with portions of adjacent repeats are transcribed and processed into CRISPR(cr) RNAs that target complementary sequences (protospacers) in mob
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5e8f0f9263d4f0e22c73d1597848c777
https://doi.org/10.1101/2023.03.03.530964
https://doi.org/10.1101/2023.03.03.530964
Autor:
Alba Guarné, Yao Shen, Michael T. Petassi, Joaquin Ortega, Joseph E. Peters, Josué Gómez-Blanco
Publikováno v:
Nature Structural & Molecular Biology. 29:143-151
Tn7 transposable elements are unique for their highly specific, and sometimes programmable, target-site selection mechanisms and precise insertions. All the elements in the Tn7-family utilize a AAA+ adaptor (TnsC) to coordinates target-site selection
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5e8564a216a4f23be3b76d1d1b0ec3ad
https://doi.org/10.1038/s41594-022-00724-8
https://doi.org/10.1038/s41594-022-00724-8
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 119(32)
CRISPR-associated transposons (CASTs) are Tn7-like elements that are capable of RNA-guided DNA integration. Although structural data are known for nearly all core transposition components, the transposase component, TnsB, remains uncharacterized. Usi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2aa291bb2a1e9843871faab60d097348
https://pubmed.ncbi.nlm.nih.gov/35914146
https://pubmed.ncbi.nlm.nih.gov/35914146
Publikováno v:
Bacterial Integrative Mobile Genetic Elements ISBN: 9780367813925
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::949ac130d014697a03cb60f3a39e04f6
https://doi.org/10.1201/9780367813925-1
https://doi.org/10.1201/9780367813925-1
Autor:
Zuzanna Kaczmarska, Mariusz Czarnocki-Cieciura, Karolina M. Górecka-Minakowska, Robert J. Wingo, Justyna Jackiewicz, Weronika Zajko, Jarosław T. Poznański, Michał Rawski, Timothy Grant, Joseph E. Peters, Marcin Nowotny
Tn7 is a bacterial transposon with relatives containing element-encoded CRISPR-Cas systems mediating RNA-guided transposon insertion. Here, we present the 2.7 Å cryoelectron microscopy structure of prototypic Tn7 transposase TnsB interacting with th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a2a826e99bb185d3405f416124106c73
https://ruj.uj.edu.pl/xmlui/handle/item/307065
https://ruj.uj.edu.pl/xmlui/handle/item/307065
Autor:
Michael T. Petassi, Amy Tsai, Jung-Un Park, Eshan Mehrotra, Shan-Chi Hsieh, Elizabeth H. Kellogg, Joseph E. Peters, Ailong Ke
Publikováno v:
Science
CRISPR-associated transposition systems allow guide RNA-directed integration of a single DNA cargo in one orientation at a fixed distance from a programmable target sequence. We used cryo-electron microscopy (cryo-EM) to define the mechanism that und
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd0715213cc1f88ce97e50fdba1766e4
https://doi.org/10.1016/j.bpj.2021.11.1096
https://doi.org/10.1016/j.bpj.2021.11.1096
Autor:
Guilhem Faure, Eugene V. Koonin, David Scott, David R. Cheng, Kira S. Makarova, Sergey Shmakov, Joseph E. Peters, Winston X. Yan
Publikováno v:
Nature Reviews Microbiology. 17:513-525
The principal function of CRISPR–Cas systems in archaea and bacteria is defence against mobile genetic elements (MGEs), including viruses, plasmids and transposons. However, the relationships between CRISPR–Cas and MGEs are far more complex. Seve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f6a8fcfa428502e79c5daa136f79c98a
https://doi.org/10.1038/s41579-019-0204-7
https://doi.org/10.1038/s41579-019-0204-7
Autor:
Gary E. Heussler, Oren S. Rosenberg, Melanie R. Silvis, Alan D. Grossman, Rachel J. Dutton, Byoung-Mo Koo, Cameron C. Hearne, Carol A. Gross, Jason M. Peters, Joanne N. Engel, Hendrik Osadnik, Joseph E. Peters, Ramiro Patino, Jiuxin Qu, M. Michael Harden, Candy H. S. Lu, Yuki F. Inclan, John S. Hawkins
Publikováno v:
Nature Microbiology. 4:244-250
The vast majority of bacteria, including human pathogens and microbiome species, lack genetic tools needed to systematically associate genes with phenotypes. This is the major impediment to understanding the fundamental contributions of genes and gen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7b9f3bec9c4eb299619667ab39be2bb
https://doi.org/10.1038/s41564-018-0327-z
https://doi.org/10.1038/s41564-018-0327-z