Zobrazeno 1 - 10
of 18
pro vyhledávání: '"Joseph D. Baugher"'
Autor:
Arthur W. Pightling, James B. Pettengill, Yan Luo, Joseph D. Baugher, Hugh Rand, Errol Strain
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
Whole-genome sequence (WGS) analysis has revolutionized the food safety industry by enabling high-resolution typing of foodborne bacteria. Higher resolving power allows investigators to identify origins of contamination during illness outbreaks and r
Externí odkaz:
https://doaj.org/article/38842db4b7084b24b45163d169ccb5a8
Autor:
Guojie Cao, Yan Luo, Marc W. Allard, Jean Guard, Maria Hoffmann, Sherrill Davison, Rebecca L. Bell, Jie Zheng, Kuan Yao, Eric W. Brown, Guodong Zhang, Joseph D. Baugher, Nathan Likens
Publikováno v:
Genomics. 112:528-544
A total of 91 draft genome sequences were used to analyze isolates of Salmonella enterica serovar Enteritidis obtained from feral mice caught on poultry farms in Pennsylvania. One objective was to find mutations disrupting open reading frames (ORFs)
Autor:
Deborah Sheehan, Eija Trees, Ruth Timme, Ashley Sabol, Errol Strain, Maria Hoffmann, Jennifer K. Adams, Maria Balkey, Rebecca L. Lindsey, Hugh Rand, Joseph D. Baugher, Patricia C. Lafon, Darlene Wagner, Heather A. Carleton
Publikováno v:
Scientific Data
Scientific Data, Vol 7, Iss 1, Pp 1-5 (2020)
Scientific Data, Vol 7, Iss 1, Pp 1-5 (2020)
The US PulseNet and GenomeTrakr laboratory networks work together within the Genomics for Food Safety (Gen-FS) consortium to collect and analyze genomic data for foodborne pathogen surveillance (species include Salmonella enterica, Listeria monocytog
Autor:
Sandra M. Tallent, Ruth Timme, Maria Sanchez Leon, Steven Davis, Marc W. Allard, Joseph D. Baugher, Narjol Gonzalez-Escalona, Errol Strain, Eric W. Brown, Hugh Rand
Publikováno v:
Journal of clinical microbiology. 57(5)
Foodborne pathogen surveillance in the United States is transitioning from strain identification using restriction digest technology (pulsed-field gel electrophoresis [PFGE]) to shotgun sequencing of the entire genome (whole-genome sequencing [WGS]).
Autor:
Joseph D. Baugher
Publikováno v:
Journal of open source software
Autor:
Ruth Timme, Marc W. Allard, Maria Hoffmann, Errol Strain, Hugh Rand, Dwayne Roberson, Maria Sanchez Leon, Joseph D. Baugher
Publikováno v:
Microbial Genomics
Pathogen monitoring is becoming more precise as sequencing technologies become more affordable and accessible worldwide. This transition is especially apparent in the field of food safety, which has demonstrated how whole-genome sequencing (WGS) can
Autor:
Marc W. Allard, Rebecca L. Bell, Maria Hoffmann, Guodong Zhang, Joseph D. Baugher, Jean Guard, Jie Zheng, Guojie Cao, Kuan Yao, Yan Luo, Sherrill Davison, Eric W. Brown
Salmonella entericaserovar Enteritidis (SE), the most commonly reported serovar of human salmonellosis, has been frequently associated with poultry farms, eggs and egg products. Mice are known vectors of SE contamination in these facilities. The obje
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::374dec2eac3ca6d3fa5f5d1d5eaeda9a
Autor:
Yan Luo, Arthur W. Pightling, Errol Strain, Hugh Rand, Joseph D. Baugher, James B. Pettengill
Publikováno v:
Frontiers in Microbiology
Frontiers in Microbiology, Vol 9 (2018)
Frontiers in Microbiology, Vol 9 (2018)
Whole-genome sequence (WGS) analysis has revolutionized the food safety industry by enabling high-resolution typing of foodborne bacteria. Higher resolving power allows investigators to identify origins of contamination during illness outbreaks and r
Publikováno v:
PLoS ONE, Vol 11, Iss 11, p e0166162 (2016)
PLoS ONE
PLoS ONE
The adoption of whole-genome sequencing within the public health realm for molecular characterization of bacterial pathogens has been followed by an increased emphasis on real-time detection of emerging outbreaks (e.g., food-borne Salmonellosis). In
Autor:
Greg Heckenberg, Eric L. Stevens, Thomas J. Downey, Elisha D.O. Roberson, Joseph D. Baugher, Jonathan Pevsner
Publikováno v:
European Journal of Human Genetics. 20:657-667
A set of Centre d'Étude du Polymorphisme Humain (CEPH) cell lines serves as a large reference collection that has been widely used as a benchmark for allele frequencies in the analysis of genetic variants, to create linkage maps of the human genome,