Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Joseph A. Bedell"'
Publikováno v:
BioTechniques, Vol 39, Iss 4, Pp 464-472 (2005)
Externí odkaz:
https://doaj.org/article/258fde5ce1d3476fae81848db3eab7c3
Autor:
Jared M Ordway, Muhammad A Budiman, Yulia Korshunova, Rebecca K Maloney, Joseph A Bedell, Robert W Citek, Blaire Bacher, Seth Peterson, Tracy Rohlfing, Jacqueline Hall, Robert Brown, Nathan Lakey, Rebecca W Doerge, Robert A Martienssen, Jorge Leon, John D McPherson, Jeffrey A Jeddeloh
Publikováno v:
PLoS ONE, Vol 2, Iss 12, p e1314 (2007)
Recent data have revealed that epigenetic alterations, including DNA methylation and chromatin structure changes, are among the earliest molecular abnormalities to occur during tumorigenesis. The inherent thermodynamic stability of cytosine methylati
Externí odkaz:
https://doaj.org/article/3fbfbfb3329f47eb9afbdeed30265bce
Autor:
Jared M. Ordway, Nathan D. Lakey, Joseph A. Bedell, Michael Finney, Robert W. Citek, H. Holemon, Jeffrey A. Jeddeloh, Jorge Leon, John Douglas Mcpherson, Yulia Korshunova
Publikováno v:
BioTechniques. 43:683-693
Aberrant gene silencing of genes through cytosine methylation has been demonstrated during the development of many types of cancers including prostate cancer. Several genes including GSTP1 have been shown to be methylated in prostate cancer leading t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::807141bedf34b877d3f160b1ab4e4a4f
https://doi.org/10.2144/000112597
https://doi.org/10.2144/000112597
Autor:
W. Richard McCombie, Joseph A. Bedell, A. O'Shaughnessy, Pablo D. Rabinowicz, Andrew Nunberg, Nathan D. Lakey, Robert A. Martienssen, Robert W. Citek, Lidia Nascimento, Muhammad A. Budiman
Publikováno v:
Genome Research. 15:1431-1440
The hypomethylated fraction of plant genomes is usually enriched in genes and can be selectively cloned using methylation filtration (MF). Therefore, MF has been used as a gene enrichment technology in sorghum and maize, where gene enrichment was pro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8aef781607eff52c2486ec4e97e6a4ae
https://doi.org/10.1101/gr.4100405
https://doi.org/10.1101/gr.4100405
Autor:
Robert Baertsch, Karen A. Phelps, Lisa Cook, Joelle Kalicki, Michelle O'Laughlin, Kerry L. Bubb, David Torrents, Kristine M. Wylie, Andrew Vanbrunt, Mark E. Schaller, Dan Layman, Kelsi Scott, LaDeana W. Hillier, Marco A. Marra, Caryn Wagner-McPherson, Cindy Strong, Phil Latreille, Hui Sun, Maynard V. Olson, Holland Bradshaw-Cordum, Amanda Abbott, Robert S. Fulton, Nicolas Berkowicz, Richard Harkins, Asif T. Chinwalla, Rajinder Kaul, William E. Nash, Chad Tomlinson, Susan M. Rock, Patricia Wohldmann, Paul Flicek, Elaine R. Mardis, Catrina Strowmatt, James M. Eldred, Betty Lamar, Christopher K. Raymond, Michael C. Wendl, Lauren Bielicki, Shawn Leonard, John Douglas Mcpherson, Christine Nguyen, Jennifer Murray, Michael C. Becker, Lucinda Fulton, Amber Isak, Will Gillett, Matt Cordes, James B. Clendenning, Kymberlie H. Pepin, Mandeep Sekhon, Eric Haugen, Feiyu Du, Theresa Rohlfing, Kimberly D. Delehaunty, Nancy Miller, Amy Kozlowicz-Reilly, Eric D. Green, W. James Kent, Tamberlyn Bieri, Peer Bork, Richard K. Wilson, Patrick Minx, John Spieth, Evan E. Eichler, Shawn Iadanoto, Terrence S. Furey, Matthew E. Portnoy, Shunfang Hou, R. James, Warren Gish, Brian Schultz, Doug Johnson, Philip Ozersky, Jennifer Edwards, Stephanie L. Chissoe, Jeffrey A. Bailey, Tracie L. Miner, Jason Maas, Andrea Holmes, Sandra W. Clifton, Sara Jaeger, Tina Graves, Ruth Levy, Joseph A. Bedell, Ginger A. Fewell, Mikita Suyama, Shiaw-Pyng Yang, Sean R. Eddy, Rebecca S. Walker, Aye-Mon Tin-Wollam, Hui Du, Evan Keibler, Matthew T. Hickenbotham, Sara Dauphin-Kohlberg, Robert H. Waterston, Yang Zhou, Stephanie Andrews, Johar Ali, John W. Wallis, Michael R. Brent, Rachel Maupin, Donald Williams, Elizabeth Simms, Laura Courtney, Anthony R. Harris, Jeffrey Woessner, Joanne O. Nelson
Publikováno v:
Nature. 424:157-164
Human chromosome 7 has historically received prominent attention in the human genetics community, primarily related to the search for the cystic fibrosis gene and the frequent cytogenetic changes associated with various forms of cancer. Here we prese
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c29b60c5416304ab9eb59426f65e8b3b
https://doi.org/10.1038/nature01782
https://doi.org/10.1038/nature01782
Autor:
Joseph A. Bedell
Publikováno v:
Biotech Software & Internet Report. 2:227-232
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9eae76fc2992aa352e4ebfc3732ff7b0
https://doi.org/10.1089/152791601317205389
https://doi.org/10.1089/152791601317205389
Autor:
Joshua Heyen, W. Bradley Barbazuk, Stephanie Tate, Ian F Korf, Edmund Wun, Joseph A. Bedell, Stephen L. Johnson, Candy Kadavi, John Douglas Mcpherson
Publikováno v:
Genome Research. 10:1351-1358
The zebrafish is an important vertebrate model for the mutational analysis of genes effecting developmental processes. Understanding the relationship between zebrafish genes and mutations with those of humans will require understanding the syntenic c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::da5eb27ca4781cbde2d13c4e8d7b05d9
https://doi.org/10.1101/gr.144700
https://doi.org/10.1101/gr.144700
Autor:
Yulia Korshunova, Tracy Rohlfing, Nathan D. Lakey, Jorge Leon, Robert W. Citek, Jacqueline A. Hall, Robert A. Martienssen, Muhammad A. Budiman, John Douglas Mcpherson, Robert S. Brown, Seth H. Peterson, Rebecca Maloney, Jeffrey A. Jeddeloh, Joseph A. Bedell, Rebecca W. Doerge, Blaire Bacher, Jared M. Ordway
Publikováno v:
Department of Statistics Faculty Publications
PLoS ONE, Vol 2, Iss 12, p e1314 (2007)
PLoS ONE
PloS one, vol 2, iss 12
PLoS ONE, Vol 2, Iss 12, p e1314 (2007)
PLoS ONE
PloS one, vol 2, iss 12
Recent data have revealed that epigenetic alterations, including DNA methylation and chromatin structure changes, are among the earliest molecular abnormalities to occur during tumorigenesis. The inherent thermodynamic stability of cytosine methylati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1fdbf0879bf1eb53ce130084d5fee421
http://hdl.handle.net/10044/1/55931
http://hdl.handle.net/10044/1/55931
Publikováno v:
BioTechniques. 39(4)
Understanding the phenotypic contribution of epigenetic components is making DNA methylation pattern analysis more important in higher eukaryotic genomes as well as human disease. Bisulfite sequencing protocols report DNA methylation occupancy inform
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::add098f307794ee5844db4eb77da0b96
https://pubmed.ncbi.nlm.nih.gov/16235556
https://pubmed.ncbi.nlm.nih.gov/16235556
Publikováno v:
BioEssays : news and reviews in molecular, cellular and developmental biology. 27(8)
Summary Plant,andparticularlycerealgenomes,arechallengingto sequence due to their large size and high repetitive DNA content. Gene-enrichment strategies are alternative or complementary approaches to complete genome sequencing that yield, rapidly and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5b1732efff9ccd3a926cf1a751a45f7
https://pubmed.ncbi.nlm.nih.gov/16015589
https://pubmed.ncbi.nlm.nih.gov/16015589