Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Jose C. Flores-Canales"'
Role of Acidic Residues in Helices TH8–TH9 in Membrane Interactions of the Diphtheria Toxin T Domain
Autor:
Chiranjib Ghatak, Mykola V. Rodnin, Mauricio Vargas-Uribe, Andrew J. McCluskey, Jose C. Flores-Canales, Maria Kurnikova, Alexey S. Ladokhin
Publikováno v:
Toxins, Vol 7, Iss 4, Pp 1303-1323 (2015)
The pH-triggered membrane insertion of the diphtheria toxin translocation domain (T domain) results in transferring the catalytic domain into the cytosol, which is relevant to potential biomedical applications as a cargo-delivery system. Protonation
Externí odkaz:
https://doaj.org/article/df02cc8fece446b9b301fa8d675fc1f1
Publikováno v:
Pedersen, K B, Flores-Canales, J C & Schiøtt, B 2023, ' Predicting molecular properties of α-synuclein using force fields for intrinsically disordered proteins ', Proteins: Structure, Function and Bioinformatics, vol. 91, no. 1, pp. 47-61 . https://doi.org/10.1002/prot.26409
Currently, upload of large files to zenodo is impractically slow. Instead, upon reasonably request, the trajectories can be shared directly contacting kasperbusk@chem.au.dk or bs@chem.au.dk Molecular Dynamics trajectory data from the publication: Pre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fce6af46e35e066e4f0d587f8796e0cd
https://pure.au.dk/portal/da/publications/predicting-molecular-properties-of-synuclein-using-force-fields-for-intrinsically-disordered-proteins(1e9faf69-8ff0-4860-8deb-bcefb81abbef).html
https://pure.au.dk/portal/da/publications/predicting-molecular-properties-of-synuclein-using-force-fields-for-intrinsically-disordered-proteins(1e9faf69-8ff0-4860-8deb-bcefb81abbef).html
Publikováno v:
Ozkan, A, Sitharam, M, Flores-Canales, J C, Prabhu, R & Kurnikova, M 2021, ' Baseline Comparisons of Complementary Sampling Methods for Assembly Driven by Short-Ranged Pair Potentials toward Fast and Flexible Hybridization ', Journal of Chemical Theory and Computation, vol. 17, no. 3, pp. 1967-1987 . https://doi.org/10.1021/acs.jctc.0c00945
This work measures baseline sampling characteristics that highlight fundamental differences between sampling methods for assembly driven by short-ranged pair potentials. Such granular comparison is essential for fast, flexible, and accurate hybridiza
Autor:
Birgit Schiøtt, Maurizio Sironi, Carlo F. Morelli, Jose C. Flores-Canales, Francesco Oliva, Stefano Pieraccini
Publikováno v:
Oliva, F, Flores-Canales, J C, Pieraccini, S, Morelli, C F, Sironi, M & Schiøtt, B 2020, ' Simulating Multiple Substrate-Binding Events by γ-Glutamyltransferase Using Accelerated Molecular Dynamics ', Journal of Physical Chemistry B, vol. 124, no. 45, pp. 10104-10116 . https://doi.org/10.1021/acs.jpcb.0c06907
γ-Glutamyltransferase (GGT) is an enzyme that uses γ-glutamyl compounds as substrates and catalyzes their transfer to a water molecule or an acceptor substrate with varied physiological function in bacteria, plants, and animals. Crystal structures
Publikováno v:
The Journal of Physical Chemistry B. 123:5024-5034
Solution acidity measured by pH is an important environmental factor that affects protein structure. It influences the protonation state of protein residues, which in turn may be coupled to protein conformational changes, unfolding, and ligand bindin
Autor:
Jose C. Flores-Canales, Laust Bavnhøj, Bjørn Panyella Pedersen, Peter Aasted Paulsen, Birgit Schiøtt
Publikováno v:
Bavnhøj, L, Paulsen, P A, Flores-Canales, J C, Schiøtt, B & Pedersen, B P 2021, ' Molecular mechanism of sugar transport in plants unveiled by structures of glucose/H + symporter STP10 ', Nature Plants, vol. 7, no. 10, pp. 1409-1419 . https://doi.org/10.1038/s41477-021-00992-0
Nature plants 7(10), 1409-1419 (2021). doi:10.1038/s41477-021-00992-0
Nature plants 7(10), 1409-1419 (2021). doi:10.1038/s41477-021-00992-0
Nature plants 7(10), 1409 - 1419 (2021). doi:10.1038/s41477-021-00992-0
Sugars are essential sources of energy and carbon and also function as key signalling molecules in plants. Sugar transport proteins (STP) are proton-coupled symporters respo
Sugars are essential sources of energy and carbon and also function as key signalling molecules in plants. Sugar transport proteins (STP) are proton-coupled symporters respo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b07e54deda89c6e08d110897279752d3
Autor:
Birgit Schiøtt, Peter Aasted Paulsen, L. Bavnhoej, Jose C. Flores-Canales, Bjørn Panyella Pedersen
Sugars are essential sources of energy and carbon, and also function as key signaling molecules in plants. Sugar Transport Proteins (STP) are proton-coupled symporters, solely responsible for uptake of glucose from the apoplastic compartment into cel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2a95e70e5a7cad63135896850d490829
https://doi.org/10.1101/2020.11.05.369397
https://doi.org/10.1101/2020.11.05.369397
Autor:
Laust, Bavnhøj, Peter Aasted, Paulsen, Jose C, Flores-Canales, Birgit, Schiøtt, Bjørn Panyella, Pedersen
Publikováno v:
Nature plants. 7(10)
Sugars are essential sources of energy and carbon and also function as key signalling molecules in plants. Sugar transport proteins (STP) are proton-coupled symporters responsible for uptake of glucose from the apoplast into plant cells. They are int
Autor:
Jose C. Flores-Canales, Francesco Oliva, Birgit Schiøtt, Stefano Pieraccini, Maurizio Sironi, Carlo F. Morelli
γ-glutamyltransferase (GGT) is an enzyme that uses γ-glutamyl compounds as substrate and catalyzes their transfer into a water molecule or an acceptor substrate with varied physiological-function in bacteria, plants and animals. Crystal structures
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::511a9fe69a1fa351241877ab2da63450
https://doi.org/10.1101/2020.04.20.050500
https://doi.org/10.1101/2020.04.20.050500
Publikováno v:
Biophysical Journal. 112:2291-2300
Ionotropic glutamate receptors are a family of tetrameric ion channels with functional states consisting of nonconducting, conducting, and desensitized states that are starting to become well characterized by electrophysiological and biophysical stud