Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Jonathan Perrie"'
Autor:
Benjamin Carter, Wai Lim Ku, Jee Youn Kang, Gangqing Hu, Jonathan Perrie, Qingsong Tang, Keji Zhao
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-5 (2019)
The authors introduce ACT-seq: a Tn5-based method for rapidly profiling epigenetic marks in bulk-cell and single-cell samples. ACT-seq avoids many laborious or time-consuming steps required for similar techniques including chromatin fragmentation and
Externí odkaz:
https://doaj.org/article/c9a8a9af0a7e477299b738bebf2bf047
Autor:
Benjamin Carter, Wai Lim Ku, Jee Youn Kang, Gangqing Hu, Jonathan Perrie, Qingsong Tang, Keji Zhao
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-1 (2020)
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
Externí odkaz:
https://doaj.org/article/65a3dd46fc92452888184587d38c9363
Publikováno v:
PeerJ, Vol 5, p e3812 (2017)
Taxonomic markers such as the 16S ribosomal RNA gene are widely used in microbial community analysis. A common first step in marker-gene analysis is grouping genes into clusters to reduce data sets to a more manageable size and potentially mitigate t
Externí odkaz:
https://doaj.org/article/008f075a09fa4d5dbc4a29574fa0f1af
Autor:
Jonathan Perrie, Jee Youn Kang, Keji Zhao, Gangqing Hu, Qingsong Tang, Wai Lim Ku, Benjamin Carter
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-5 (2019)
Nature Communications
Nature Communications
Modern next-generation sequencing-based methods have empowered researchers to assay the epigenetic states of individual cells. Existing techniques for profiling epigenetic marks in single cells often require the use and optimization of time-intensive
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a3ffba5da146ec9fd80e42a6ae2dbabd
https://doi.org/10.1038/s41467-019-11559-1
https://doi.org/10.1038/s41467-019-11559-1
Autor:
Gangqing Hu, Tingting Zhao, Bing Ni, Weiwu Gao, Wai Lim Ku, Jonathan Perrie, Lixia Pan, Yuzhang Wu, Jun Zhu, Keji Zhao
Publikováno v:
Nucleic Acids Research
Single cell chromatin accessibility assays reveal epigenomic variability at cis-regulatory elements among individual cells. We previously developed a single-cell DNase-seq assay (scDNase-seq) to profile accessible chromatin in a limited number of sin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a5f833be759a9c9d338103a7ed6f2244
https://doi.org/10.1093/nar/gkab102
https://doi.org/10.1093/nar/gkab102
Autor:
Jonathan Perrie, Katherine D. McMahon, Robin Rebecca Rohwer, Michael W. Hall, Robert G. Beiko
Publikováno v:
PeerJ, Vol 5, p e3812 (2017)
PeerJ
PeerJ
Taxonomic markers such as the 16S ribosomal RNA gene are widely used in microbial community analysis. A common first step in marker-gene analysis is grouping genes into clusters to reduce data sets to a more manageable size and potentially mitigate t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::401d5fbfc0c61b70288d68727230c587
https://peerj.com/articles/3812/
https://peerj.com/articles/3812/