Zobrazeno 1 - 10
of 15
pro vyhledávání: '"John R Houser"'
Publikováno v:
Molecular Systems Biology, Vol 8, Iss 1, Pp 1-10 (2012)
Abstract All cells must detect and respond to changes in their environment, often through changes in gene expression. The yeast pheromone pathway has been extensively characterized, and is an ideal system for studying transcriptional regulation. Here
Externí odkaz:
https://doaj.org/article/819fd0f71c6944a19db54143f162e2fb
Autor:
John R Houser, Craig Barnhart, Daniel R Boutz, Sean M Carroll, Aurko Dasgupta, Joshua K Michener, Brittany D Needham, Ophelia Papoulas, Viswanadham Sridhara, Dariya K Sydykova, Christopher J Marx, M Stephen Trent, Jeffrey E Barrick, Edward M Marcotte, Claus O Wilke
Publikováno v:
PLoS Computational Biology, Vol 11, Iss 8, p e1004400 (2015)
How do bacteria regulate their cellular physiology in response to starvation? Here, we present a detailed characterization of Escherichia coli growth and starvation over a time-course lasting two weeks. We have measured multiple cellular components,
Externí odkaz:
https://doaj.org/article/9de889c5ee104d68a308ff43690012fc
Autor:
Wisath Sae-Lee, Caitlyn L. McCafferty, Eric J. Verbeke, Pierre C. Havugimana, Ophelia Papoulas, Claire D. McWhite, John R. Houser, Kim Vanuytsel, George J. Murphy, Kevin Drew, Andrew Emili, David W. Taylor, Edward M. Marcotte
Publikováno v:
Cell reports. 40(3)
SUMMARYRed blood cells (RBCs, erythrocytes) are the simplest primary human cells, lacking nuclei and major organelles, and instead employing about a thousand proteins to dynamically control cellular function and morphology in response to physiologica
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eef9c266a02dffbecb0aa0f495086a61
https://pubmed.ncbi.nlm.nih.gov/35858567
https://pubmed.ncbi.nlm.nih.gov/35858567
Autor:
Matthew I. Peña, Timothy C. Elston, Gauri Dixit, Henrik G. Dohlman, John R. Houser, Amy E. Pomeroy, Beverly Errede
Publikováno v:
Science signaling. 14(670)
Cells use signaling pathways to receive and process information about their environment. These nonlinear systems rely on feedback and feedforward regulation to respond appropriately to changing environmental conditions. Mathematical models describing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4764b37e7425b11338bea201a4d1bcc
https://pubmed.ncbi.nlm.nih.gov/33593998
https://pubmed.ncbi.nlm.nih.gov/33593998
Autor:
Matthew I. Peña, Beverly Errede, Timothy C. Elston, Gauri Dixit, Amy E. Pomeroy, Henrik G. Dohlman, John R. Houser
Cells use signaling pathways to receive and process information about their environment. These systems are nonlinear, relying on feedback and feedforward regulation to respond appropriately to changing environmental conditions. Mathematical models de
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fbc79b7904249f6833faa03cc8c15254
https://doi.org/10.1101/2020.06.23.167205
https://doi.org/10.1101/2020.06.23.167205
Publikováno v:
Molecular Cell. 55(1):85-96
G proteins and their associated receptors process information from a variety of environmental stimuli to induce appropriate cellular responses. Generally speaking, each cell in a population responds within defined limits, despite large variation in t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0558b45f94a3238079c641c6490e4283
Autor:
Viswanadham Sridhara, Sean M. Carroll, Jeffrey E. Barrick, Daniel R. Boutz, Drew Vander Wood, Claus O. Wilke, Bartram L. Smith, Edward M. Marcotte, Christopher J. Marx, Craig S. Barnhart, Walter F. Lenoir, Aurko Dasgupta, Dariya K. Sydykova, Mehmet Umut Caglar, John R. Houser
Publikováno v:
Scientific Reports
Modern systems biology requires extensive, carefully curated measurements of cellular components in response to different environmental conditions. While high-throughput methods have made transcriptomics and proteomics datasets widely accessible and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::77387fe424bcc22f431a1ad8aa1f6165
Autor:
Marvin Whiteley, John R. Houser, Atsuo Amano, Samar A. Alghamdi, Masae Kuboniwa, Akito Sakanaka, Justin A Hutcherson, Tiansong Wang, Richard J. Lamont, Daniel P. Miller, Huizhi Wang, Murray Hackett, David A. C. Beck, Erik L. Hendrickson, Edward M. Marcotte, Qian Wang
Publikováno v:
Nature microbiology
Many human infections are polymicrobial in origin, and interactions among community inhabitants shape colonization patterns and pathogenic potential 1 . Periodontitis, which is the sixth most prevalent infectious disease worldwide 2 , ensues from the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::74cdbe4a26bbabc6c61be6e08b80763e
https://pubmed.ncbi.nlm.nih.gov/28924191
https://pubmed.ncbi.nlm.nih.gov/28924191
Autor:
John R. Houser, Seth Maleri, Eintou Ford, Beverly Errede, Timothy C. Elston, Sudeshna M. Chatterjea
Publikováno v:
Yeast. 29:519-530
Ideal reporter genes for temporal transcription programmes have short half-lives that restrict their detection to the window in which their transcripts are present and translated. In an effort to meet this criterion for reporters of transcription in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8a34f1faab8f62f249fb4357a90eea7f
https://doi.org/10.1002/yea.2932
https://doi.org/10.1002/yea.2932
Autor:
Daniel R. Boutz, Craig S. Barnhart, Ophelia Papoulas, John R. Houser, Brittany D. Needham, Claus O. Wilke, Sean M. Carroll, Dariya K. Sydykova, Joshua K. Michener, Jeffrey E. Barrick, Viswanadham Sridhara, Edward M. Marcotte, Christopher J. Marx, M. Stephen Trent, Aurko Dasgupta
Publikováno v:
PLoS Computational Biology
PLoS Computational Biology, Vol 11, Iss 8, p e1004400 (2015)
PLoS Computational Biology, Vol 11, Iss 8, p e1004400 (2015)
How do bacteria regulate their cellular physiology in response to starvation? Here, we present a detailed characterization of Escherichia coli growth and starvation over a time-course lasting two weeks. We have measured multiple cellular components,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15cd6bc64e0cc851c3425339c6a3b9fa
https://pubmed.ncbi.nlm.nih.gov/26275208
https://pubmed.ncbi.nlm.nih.gov/26275208