Zobrazeno 1 - 10
of 11
pro vyhledávání: '"John R Haliburton"'
Publikováno v:
PLoS ONE, Vol 12, Iss 2, p e0171302 (2017)
Genetic interaction mapping is useful for understanding the molecular basis of cellular decision making, but elucidating interactions genome-wide is challenging due to the massive number of gene combinations that must be tested. Here, we demonstrate
Externí odkaz:
https://doaj.org/article/c1a2ca4f240a4bc9be8c0d0239794312
Publikováno v:
Nature Communications, Vol 7, Iss 1, Pp 1-10 (2016)
The ability to accurately sequence long DNA molecules is important across biology. Here, Lan et al. report a droplet-based method that barcodes single DNA molecules, allowing the full-length molecules to be sequenced with multi-fold coverage using sh
Externí odkaz:
https://doaj.org/article/4515e37d471a4e2ab6daee8b7d910e97
Publikováno v:
Methods in Molecular Biology ISBN: 9781071617700
Methods Mol Biol
Methods Mol Biol
DNA barcoding of individual cells combined with next-generation sequencing enables high-throughput parallel analysis of biomolecules at the single-cell level. Encoding protein identity with DNA barcoding of specific antibody binders achieves sequenci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ebad7ca158f203376f64afe4430504cf
https://doi.org/10.1007/978-1-0716-1771-7_7
https://doi.org/10.1007/978-1-0716-1771-7_7
Autor:
Becky Xu Hua Fu, Erin M. Thompson, Agnes Protacio Chan, Zara Y. Weinberg, Alain R Bonny, Samantha Hao, Nicholas Hoppe, Aparna Bhaduri, Angela Constantino, Fauna Yarza, Suping Peng, Lillian B. Cohn, Gajus Worthington, Paula Hayakawa Serpa, Diana M. Marquez, Rafael Gomez-Sjoberg, Saharai Caldera, Norma Neff, Neha Pincha, Peter Picard, Andrew Cote, Diter Oviedo, Shayan Hosseinzadeh, Robert Puccinelli, Danielle Ingebrigtsen, Serena Tamura, Sergei Pourmal, Jeffrey A. Hussmann, Anica M. Wandler, M. Grace Gordon, Irene Acosta, Shweta Gupta, Jeremy Bancroft Brown, Joseph L. DeRisi, Shannon Axelrod, Andreas S. Puschnik, Lindsey M. Pieper, Joseph M. Replogle, Valentina E. Garcia, James Reese, Patrick Ayscue, Arthur Charles-Orszag, Iliana Tenvooren, Eric Tse, Alison Fanton, Elze Rackaityte, Charles Y. Chiu, Aileen W. Li, Edward Thornborrow, Amy Lyden, Katelyn A. Cabral, Sukrit Silas, Kun Leng, Erika Anderson, Lusajo L. Mwakibete, Shaun Arevalo, Gabriela Canales, Calla Martyn, Gorica Margulis, Andrew F. Kung, Sophia R. Levan, Tanzila Mukhtar, Carly K. Cheung, Jonathan Sheu, Sam Li, Charles Langelier, Gloria Castaneda, Tina Zheng, Maureen Sheehy, Rebecca Egger, Amy Kistler, Alexander F. Merriman, Sara Sunshine, Cody T. Mowery, Madhura Raghavan, Allison Cohen, Terrina Yamamoto, Mitchel A. Cole, Saumya R. Bollam, Megan Moore, Preethi Raghavan, Jessie Kulsuptrakul, Stacey M. Frumm, Manu Vanaerschot, Fang Xie, Daniel Asarnow, Miriam Goldman, Pierce Hadley, Sara E. Vazquez, Michelle Tan, Kristin K. Sellers, Lindsay A. Osso, Lauren K. Meyer, Daniel N. Conrad, Sabrina A Mann, Vida Ahyong, Kristoffer E. Leon, Un Seng Chio, Camillia S. Azimi, Bryan Marsh, Anne E. Wapniarski, Stefanie Bachl, Kit Ying E. Ho, Rigney E. Turnham, Aaron McGeever, Cassandra E. Burnett, Rebekah Dial, Caleigh M. Azumaya, Helen Reyes, Victoria S. Turner, Jiongyi Tan, Emily D. Crawford, Allison W. Wong, Spyros Darmanis, Shen Dong, Lena Lee, Y. Rose Citron, Christopher R. Chang, Astrid Behnert, Ziad M. Jowhar, Nadia Herrera, Doug Stryke, Lauren Byrnes, Albert Xu, James C. R. Grove, Cristina M. Tato, George C. Hartoularos, Tony Tung, Iris Bachmutsky, Ryan M. Boileau, Peter Suslow, Jessica Streithorst, Alexis Haddjeri-Hopkins, John R. Haliburton, Conor J Howard, Angela Oliveira Pisco, Eric D. Chow, Elizabeth E. McCarthy, Joshua Batson, Oriana Kreutzfeld, Elizabeth Hwang, Hanna Retallack, Danielle Kain, Alice Tang, Jack C. Taylor, Emily C. Wong, Donald Rose, Julia R. Jackson, Alexandra Westbrook, Matthew T. Laurie, Jennifer Mann, Renaldo Sutanto, Mary J. Turocy, Trisha V. Vaidyanathan, Melissa Hilberg, Stephanie K. See, David S. Booth, Christina Gladkova, Jack Strickland, Julie M. Garcia, Marc L. Turner, David Dynerman, Manuel D. Leonetti, Laura Savy, Noelle Narez, Jamin Liu, Ilia D. Vainchtein, Ying Yang, Kiet T. Phong, Tre’Jon Crayton-Hall, David Brown, Marci F. Rosenberg, Bryan Buie, Maira Phelps, Sydney M. Sattler, Elias Duarte, Yefim Zaltsman, Angela M. Detweiler, Estella Sanchez-Guerrero, Joana P. Cabrera, Michael Jerico B. Borja, James Y. S. Kim, Heidi S. Lubin, Angela Pogson, Steve Miller, James T. Webber
Publikováno v:
PLoS Pathogens, Vol 16, Iss 10, p e1008966 (2020)
PLoS Pathogens
PLoS Pathogens
Author(s): Crawford, Emily D; Acosta, Irene; Ahyong, Vida; Anderson, Erika C; Arevalo, Shaun; Asarnow, Daniel; Axelrod, Shannon; Ayscue, Patrick; Azimi, Camillia S; Azumaya, Caleigh M; Bachl, Stefanie; Bachmutsky, Iris; Bhaduri, Aparna; Brown, Jeremy
Autor:
Margaret C. Fang, Olga Borisovna Botvinnik, Sabrina A Mann, Priya A. Prasad, Luis Rubio, Amy Kistler, Guixia Yu, Joseph L. DeRisi, Sachin J. Shah, Charles Y. Chiu, Jennifer M. Babik, Andrew D. Kerkhoff, Kirsten N. Kangelaris, Natasha Spottiswoode, Nader Najafi, Kyla D Sherwood, Katherine Malcolm, Jack Kamm, Lusajo L. Mwakibete, Jonathan Sheu, John R. Haliburton, Xianding Deng, Samantha Hao, Narges Alipanah, Kalani Ratnasiri, Rupa K Mary, Angela Oliveira Pisco, Maira Phelps, Jennifer Davis, Angela M. Detweiler, Eran Mick, Michael J. Peluso, Charles Langelier, Sandra P Martinez, Peter N Barish, G. Renuka Kumar, Yumiko Abe-Jones, Gloria Castaneda, Scot Federman, Norma Neff, Michelle Tan, Lucy M Li, Rand Dadasovich, Francisco N Alvarez, Anna B Sellas
Publikováno v:
EClinicalMedicine
EClinicalMedicine, Vol 27, Iss, Pp 100518-(2020)
EClinicalMedicine, Vol 27, Iss, Pp 100518-(2020)
Author(s): Shah, Sachin J; Barish, Peter N; Prasad, Priya A; Kistler, Amy; Neff, Norma; Kamm, Jack; Li, Lucy M; Chiu, Charles Y; Babik, Jennifer M; Fang, Margaret C; Abe-Jones, Yumiko; Alipanah, Narges; Alvarez, Francisco N; Botvinnik, Olga Borisovna
Autor:
Jong H. Park, Sisi Chen, Flavia Pichiorri, Tiffany Tsou, Matt Thomson, Paul Rivaud, Emeric J Charles, John R Haliburton
Publikováno v:
Proc Natl Acad Sci U S A
Single-cell measurement techniques can now probe gene expression in heterogeneous cell populations from the human body across a range of environmental and physiological conditions. However, new mathematical and computational methods are required to r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::94b34a17cb3290149509fc8755a792e9
Publikováno v:
Scientific Reports
Scientific reports, vol 7, iss 1
Scientific reports, vol 7, iss 1
Proteins are the primary effectors of cellular function, including cellular metabolism, structural dynamics, and information processing. However, quantitative characterization of proteins at the single-cell level is challenging due to the tiny amount
Autor:
Iain C. Clark, David A. Weitz, Reisa A. Sperling, Adam R. Abate, Samuel Kim, John R. Haliburton
Publikováno v:
Biomicrofluidics, vol 11, iss 3
Biomicrofluidics
Biomicrofluidics
Droplet microfluidic techniques can perform large numbers of single molecule and cell reactions but often require controlled, periodic flow to merge, split, and sort droplets. Here, we describe a simple method to convert aperiodic flows into periodic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4db51346fae558016c8b7ec5e61b8ec2
https://publica.fraunhofer.de/handle/publica/248769
https://publica.fraunhofer.de/handle/publica/248769
Publikováno v:
Nature communications, vol 7, iss 1
Nature Communications
Nature Communications, Vol 7, Iss 1, Pp 1-10 (2016)
Nature Communications
Nature Communications, Vol 7, Iss 1, Pp 1-10 (2016)
The ability to accurately sequence long DNA molecules is important across biology, but existing sequencers are limited in read length and accuracy. Here, we demonstrate a method to leverage short-read sequencing to obtain long and accurate reads. Usi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c7b94236d312bf2dc342d1854d7a4d85
https://escholarship.org/uc/item/7wq7654f
https://escholarship.org/uc/item/7wq7654f
Autor:
Adam R. Abate, Eric D. Chow, Elliot Stieglitz, Y. Lucy Liu, John R. Haliburton, Camille B. Troup, Todd A. Alonzo, Yong-Dong Wang, Kyle Beckman, Amaro Taylor-Weiner, Mignon L. Loh, Robert B. Gerbing, Benjamin S. Braun, Peter D. Emanuel, Laura C. Gelston, Kristie B. Yu, Jon Akutagawa
Publikováno v:
Blood. 125(3)
Juvenile myelomonocytic leukemia (JMML) is an aggressive myeloproliferative neoplasm of childhood associated with a poor prognosis. Recently, massively parallel sequencing has identified recurrent mutations in the SKI domain of SETBP1 in a variety of