Zobrazeno 1 - 10
of 25
pro vyhledávání: '"John D. Blischak"'
OmicNavigator: open-source software for the exploration, visualization, and archival of omic studies
Autor:
Terrence R. Ernst, John D. Blischak, Paul Nordlund, Joe Dalen, Justin Moore, Akshay Bhamidipati, Pankaj Dwivedi, Joe LoGrasso, Marco Rocha Curado, Brett Warren Engelmann
Publikováno v:
BMC Bioinformatics, Vol 25, Iss 1, Pp 1-10 (2024)
Abstract Background The results of high-throughput biology (‘omic’) experiments provide insight into biological mechanisms but can be challenging to explore, archive and share. The scale of these challenges continues to grow as omic research volu
Externí odkaz:
https://doaj.org/article/da5c781ee7424b5d975e1ed6e5bb02cd
Autor:
Lauren E. Blake, Samantha M. Thomas, John D. Blischak, Chiaowen Joyce Hsiao, Claudia Chavarria, Marsha Myrthil, Yoav Gilad, Bryan J. Pavlovic
Publikováno v:
Genome Biology, Vol 19, Iss 1, Pp 1-18 (2018)
Abstract Background There is substantial interest in the evolutionary forces that shaped the regulatory framework in early human development. Progress in this area has been slow because it is difficult to obtain relevant biological samples. Induced p
Externí odkaz:
https://doaj.org/article/dd38d81b30244cec9b99740c49443fe0
Autor:
John D. Blischak, Ludovic Tailleux, Marsha Myrthil, Cécile Charlois, Emmanuel Bergot, Aurélien Dinh, Gloria Morizot, Olivia Chény, Cassandre Von Platen, Jean-Louis Herrmann, Roland Brosch, Luis B. Barreiro, Yoav Gilad
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-11 (2017)
Abstract Tuberculosis (TB) is a deadly infectious disease, which kills millions of people every year. The causative pathogen, Mycobacterium tuberculosis (MTB), is estimated to have infected up to a third of the world’s population; however, only app
Externí odkaz:
https://doaj.org/article/ffefa45ee3b3462d9dbdbe1fa3f7f223
Publikováno v:
F1000Research, Vol 8 (2019)
Making scientific analyses reproducible, well documented, and easily shareable is crucial to maximizing their impact and ensuring that others can build on them. However, accomplishing these goals is not easy, requiring careful attention to organizati
Externí odkaz:
https://doaj.org/article/1e789e14047d4ad080773629aae125af
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 6, Iss 5, Pp 1345-1355 (2016)
The active form of vitamin D, 1,25-dihydroxyvitamin D3 (1,25D), plays an important immunomodulatory role, regulating transcription of genes in the innate and adaptive immune system. The present study examines patterns of transcriptome-wide response t
Externí odkaz:
https://doaj.org/article/9c09026c70ea41799f46da46a8c28350
Autor:
Yannick Fourne, Brett W. Engelmann, Zia Khan, John D. Blischak, Michael J. Ford, Chiaowen Joyce Hsiao, Yoav Gilad
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-13 (2018)
Scientific Reports
Scientific Reports
Phosphorylation of proteins on serine, threonine, and tyrosine residues is a ubiquitous post-translational modification that plays a key part of essentially every cell signaling process. It is reasonable to assume that inter-individual variation in p
Autor:
Roland Brosch, Aurélien Dinh, Luis B. Barreiro, Yoav Gilad, John D. Blischak, Cécile Charlois, Cassandre Von Platen, Olivia Chény, Ludovic Tailleux, Jean-Louis Herrmann, Gloria Morizot, Marsha Myrthil, E. Bergot
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-11 (2017)
Scientific Reports
Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.5702. ⟨10.1038/s41598-017-05878-w⟩
Scientific Reports, 2017, 7 (1), pp.5702. ⟨10.1038/s41598-017-05878-w⟩
Scientific Reports
Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.5702. ⟨10.1038/s41598-017-05878-w⟩
Scientific Reports, 2017, 7 (1), pp.5702. ⟨10.1038/s41598-017-05878-w⟩
Tuberculosis (TB) is a deadly infectious disease, which kills millions of people every year. The causative pathogen, Mycobacterium tuberculosis (MTB), is estimated to have infected up to a third of the world’s population; however, only approximatel
Publikováno v:
F1000Research
Making scientific analyses reproducible, well documented, and easily shareable is crucial to maximizing their impact and ensuring that others can build on them. However, accomplishing these goals is not easy, requiring careful attention to organizati
Autor:
John D. Blischak, Kenneth Barr, Kushal K. Dey, Po-Yuan Tung, Yoav Gilad, Chiaowen Joyce Hsiao, Matthew Stephens, Jonathan E. Burnett
Publikováno v:
Genome Res
Cellular heterogeneity in gene expression is driven by cellular processes such as cell cycle and cell-type identity, and cellular environment such as spatial location. The cell cycle, in particular, is thought to be a key driver of cell-to-cell heter
Publikováno v:
G3: Genes|Genomes|Genetics
G3: Genes, Genomes, Genetics, Vol 6, Iss 5, Pp 1345-1355 (2016)
G3: Genes, Genomes, Genetics, Vol 6, Iss 5, Pp 1345-1355 (2016)
The active form of vitamin D, 1,25-dihydroxyvitamin D3 (1,25D), plays an important immunomodulatory role, regulating transcription of genes in the innate and adaptive immune system. The present study examines patterns of transcriptome-wide response t