Zobrazeno 1 - 10
of 18
pro vyhledávání: '"John Coller"'
Autor:
Brian S. White, Aurélien de Reyniès, Aaron M. Newman, Joshua J. Waterfall, Andrew Lamb, Florent Petitprez, Yating Lin, Rongshan Yu, Martin E. Guerrero-Gimenez, Sergii Domanskyi, Gianni Monaco, Verena Chung, Jineta Banerjee, Daniel Derrick, Alberto Valdeolivas, Haojun Li, Xu Xiao, Shun Wang, Frank Zheng, Wenxian Yang, Carlos A. Catania, Benjamin J. Lang, Thomas J. Bertus, Carlo Piermarocchi, Francesca P. Caruso, Michele Ceccarelli, Thomas Yu, Xindi Guo, Julie Bletz, John Coller, Holden Maecker, Caroline Duault, Vida Shokoohi, Shailja Patel, Joanna E. Liliental, Stockard Simon, Tumor Deconvolution DREAM Challenge consortium, Julio Saez-Rodriguez, Laura M. Heiser, Justin Guinney, Andrew J. Gentles
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-22 (2024)
Abstract We evaluate deconvolution methods, which infer levels of immune infiltration from bulk expression of tumor samples, through a community-wide DREAM Challenge. We assess six published and 22 community-contributed methods using in vitro and in
Externí odkaz:
https://doaj.org/article/fbdd2912b0694dcb86f190414734e1ac
Autor:
Brian S. White, Aurélien de Reyniès, Aaron M. Newman, Joshua J. Waterfall, Andrew Lamb, Florent Petitprez, Yating Lin, Rongshan Yu, Martin E. Guerrero-Gimenez, Sergii Domanskyi, Gianni Monaco, Verena Chung, Jineta Banerjee, Daniel Derrick, Alberto Valdeolivas, Haojun Li, Xu Xiao, Shun Wang, Frank Zheng, Wenxian Yang, Carlos A. Catania, Benjamin J. Lang, Thomas J. Bertus, Carlo Piermarocchi, Francesca P. Caruso, Michele Ceccarelli, Thomas Yu, Xindi Guo, Julie Bletz, John Coller, Holden Maecker, Caroline Duault, Vida Shokoohi, Shailja Patel, Joanna E. Liliental, Stockard Simon, Tumor Deconvolution DREAM Challenge consortium, Julio Saez-Rodriguez, Laura M. Heiser, Justin Guinney, Andrew J. Gentles
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-2 (2024)
Externí odkaz:
https://doaj.org/article/60d2aa816a5d4ae3ae77059ab8a373e3
Autor:
Michael Januszyk, Michelle Griffin, Shamik Mascharak, Heather E. Talbott, Kellen Chen, Dominic Henn, Amanda F. Spielman, Jennifer B.L. Parker, Norah E. Liang, Asha Cotterell, Nicholas Guardino, Deshka S. Foster, Dhananjay Wagh, John Coller, Geoffrey C. Gurtner, Derrick C. Wan, Michael T. Longaker
Publikováno v:
STAR Protocols, Vol 4, Iss 1, Pp 101946- (2023)
Summary: Despite its rapidly increased availability for the study of complex tissue, single-cell RNA sequencing remains prohibitively expensive for large studies. Here, we present a protocol using oligonucleotide barcoding for the tagging and pooling
Externí odkaz:
https://doaj.org/article/2de5342d346f4c9a9e36c09ca4833ca7
Autor:
Nicola P. Klein, Ousseny Zerbo, Kristin Goddard, Weiqi Wang, Alison E. Fohner, Amy Wiesner, Vida Shokoohi, John Coller, Karin Bok, Hayley A. Gans
Publikováno v:
Human Vaccines & Immunotherapeutics, Vol 17, Iss 6, Pp 1763-1769 (2021)
Children have elevated fever risk 1 to 2 weeks after the first dose of a measles-containing vaccine (MCV), which is likely affected by genetic, immunologic, and clinical factors. Fever after MCV is associated with febrile seizures, though may also be
Externí odkaz:
https://doaj.org/article/32df1bf05abd4507abced85cd515de40
Autor:
Luqia Hou, Joseph J. Kim, Maureen Wanjare, Bhagat Patlolla, John Coller, Vanita Natu, Trevor J. Hastie, Ngan F. Huang
Publikováno v:
Scientific Reports, Vol 7, Iss 1, Pp 1-12 (2017)
Abstract Endothelial cells derived from human pluripotent stem cells are a promising cell type for enhancing angiogenesis in ischemic cardiovascular tissues. However, our understanding of microenvironmental factors that modulate the process of endoth
Externí odkaz:
https://doaj.org/article/b834ecd2de884f21b8fd182ebae0603e
Autor:
Masanao Sato, Kenichi Tsuda, Lin Wang, John Coller, Yuichiro Watanabe, Jane Glazebrook, Fumiaki Katagiri
Publikováno v:
PLoS Pathogens, Vol 6, Iss 7, p e1001011 (2010)
Biological signaling processes may be mediated by complex networks in which network components and network sectors interact with each other in complex ways. Studies of complex networks benefit from approaches in which the roles of individual componen
Externí odkaz:
https://doaj.org/article/057f6235e0194c968096271ad9c80b6d
Autor:
Diana Wu, Trevor Feagin, Peter Mage, Alexandra Rangel, Leighton Wan, Dehui Kong, Anping Li, John Coller, Michael Eisenstein, Hyongsok Soh
Publikováno v:
Analytical Chemistry. 95:2645-2652
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::df77866d2299d4fb0c0392ffb0056038
https://doi.org/10.1021/acs.analchem.1c04777
https://doi.org/10.1021/acs.analchem.1c04777
Autor:
Zinaida Good, Jay Y. Spiegel, Bita Sahaf, Meena B. Malipatlolla, Zach J. Ehlinger, Sreevidya Kurra, Moksha H. Desai, Warren D. Reynolds, Anita Wong Lin, Panayiotis Vandris, Fang Wu, Snehit Prabhu, Mark P. Hamilton, John S. Tamaresis, Paul J. Hanson, Shabnum Patel, Steven A. Feldman, Matthew J. Frank, John H. Baird, Lori Muffly, Gursharan K. Claire, Juliana Craig, Katherine A. Kong, Dhananjay Wagh, John Coller, Sean C. Bendall, Robert J. Tibshirani, Sylvia K. Plevritis, David B. Miklos, Crystal L. Mackall
Publikováno v:
Nature Medicine. 28:1860-1871
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a284073da540a5e330f056d140435715
https://doi.org/10.1038/s41591-022-01960-7
https://doi.org/10.1038/s41591-022-01960-7
Autor:
Branimir I. Sikic, Patricia Vrignaud, Diana Brassard, John Coller, Francisco J. Martinez, John C. Rose, E. Brian Francisco, Yan C. Wang, George E. Duran
The supplementary data include one table and 5 figures. Table S1 presents cabazitaxel cytotoxic activity in the human breast cancer cell line MCF-7, uterine sarcoma cell line MES-SA, and ovarian cancer cell lines ES-2, MES-OV, and OVCAR-3. Figure S1
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e2b0d1bf1df6cb80f1b6337b788ba3c5
https://doi.org/10.1158/1535-7163.22502196
https://doi.org/10.1158/1535-7163.22502196
Autor:
Zinaida Good, Mark P. Hamilton, Jay Y. Spiegel, Sreevidya Kurra, Moksha H. Desai, Snehit Prabhu, Shin-Heng Chiou, Christine Y. Yeh, Yiyun Chen, Eric Yang, Michael G. Ozawa, Fang Wu, Matthew J. Frank, Lori Muffly, Gursharan K. Claire, Juliana Craig, Maria I. Iglesias, Sushma Bharadwaj, Katherine A. Kong, Dhananjay Wagh, John Coller, Mark M. Davis, Sylvia K. Plevritis, Bita Sahaf, David B. Miklos, Crystal L. Mackall
Publikováno v:
Cancer Research. 83:1128-1128
Autologous T cells genetically engineered to express a chimeric antigen receptor (CAR) targeting CD19 and/or CD22 have achieved high complete response rates in patients with hematologic malignancies, but >50% of patients progress following therapy. H
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8f2f28176ae637d7ebefe89ff4d40a9f
https://doi.org/10.1158/1538-7445.am2023-1128
https://doi.org/10.1158/1538-7445.am2023-1128