Zobrazeno 1 - 8
of 8
pro vyhledávání: '"John, Bodeau"'
Autor:
Pranapda Katie Aumsuwan, Steve Berosik, Patricia Chege, Adam Sannicandro, Siva Samsani, John Bodeau, Greg Foster, David Rodriguez, Erin Lagier, Stephanie Chee, Scott Nelson, Carole Bornarth
Publikováno v:
Forensic Science International: Genetics Supplement Series. 8:228-231
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::01e898325e6d7e5f43cb9dde2c8bbf96
https://doi.org/10.1016/j.fsigss.2022.10.044
https://doi.org/10.1016/j.fsigss.2022.10.044
Autor:
Clarence Lee, Xiaohui Wang, Asim Siddiqui, Brian B. Tuch, John Bodeau, Fuchou Tang, Catalin Barbacioru, Yangzhou Wang, Nanlan Xu, M. Azim Surani, Ellen Nordman, Kaiqin Lao
Publikováno v:
Nature Methods. 6:377-382
Next-generation sequencing technology is a powerful tool for transcriptome analysis. However, under certain conditions, only a small amount of material is available, which requires more sensitive techniques that can preferably be used at the single-c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f69748f0be9904a222b2b457e343bb37
https://doi.org/10.1038/nmeth.1315
https://doi.org/10.1038/nmeth.1315
Autor:
Sowmi Utiramerur, Milan Radovich, Jeffrey K. Ichikawa, Yongzhi Chen, Fiona Hyland, Kelli Bramlett, Paolo Vatta, Vidya Kudlingar, Liviu Popescu, Heinz Breu, Yulei N. Wang, Robert C. Nutter, P. Whitley, Asim S. Siddiqui, Nriti Garg, Matthew W. Muller, Benjamin S. Kong, John Bodeau, Catalin Barbacioru, Zheng Zhang, Joel Brockman, Onur Sakarya, Chieh-Yuan Li, Jian Gu
Publikováno v:
PLoS Computational Biology
PLoS Computational Biology, Vol 8, Iss 4, p e1002464 (2012)
PLoS Computational Biology, Vol 8, Iss 4, p e1002464 (2012)
High-throughput RNA sequencing enables quantification of transcripts (both known and novel), exon/exon junctions and fusions of exons from different genes. Discovery of gene fusions–particularly those expressed with low abundance– is a challenge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eee026de4b4b245a7aad9b5db0532ae5
http://europepmc.org/articles/PMC3320572
http://europepmc.org/articles/PMC3320572
Autor:
Kai Q, Lao, Fuchou, Tang, Catalin, Barbacioru, Yangzhou, Wang, Ellen, Nordman, Clarence, Lee, Nanlan, Xu, Xiaohui, Wang, Brain, Tuch, John, Bodeau, Asim, Siddiqui, M Azim, Surani
Publikováno v:
Journal of biomolecular techniques : JBT. 20(5)
We have developed a sequencing-based gene expression profiling assay at single-cell resolution by combining a modified single-cell whole transcriptome amplification method with the next generation sequencing technique, the SOLiD™ system. Using this
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::3a4d31303be80bf3a4ce1242145c1cd0
https://pubmed.ncbi.nlm.nih.gov/19949700
https://pubmed.ncbi.nlm.nih.gov/19949700
Autor:
Sueh-Ning Liew, Dennis A. Gilbert, Peter Casey, Victoria L. Boyd, Andrea Hafeman, Norman Ho, Katherine D. Lazaruk, Victor Belonogoff, Steven Rabkin, John Bodeau, Sergei Maltchenko, Alisa Bredo, Sheri J. Olson, Gene Spier, Somaya Bit, Lily Y. Wong, Erwin Chu, Susanne Baumhueter, Craig Sumner
Publikováno v:
Journal of biotechnology. 101(3)
GeneTag™ is a novel expression profiling method that allows the visualization, quantification and identification of expressed genes—whether known or novel—in any species, tissue or cell type, independent of knowledge of the underlying sequence.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43c16dd3195c04f6d5e35c3ea43648f1
https://pubmed.ncbi.nlm.nih.gov/12615390
https://pubmed.ncbi.nlm.nih.gov/12615390
Autor:
A. van Kammen, John Bodeau, Valerie M. Williamson, P. Fransz, P. Zabel, J.H. de Jong, Xiao-bo Zhong
Publikováno v:
Theoretical and Applied Genetics, 98, 3-4
Theoretical and Applied Genetics 98 (1999)
Theoretical and Applied Genetics 98 (1999)
The root-knot nematode resistance gene Mi-1 in tomato has long been thought to be located in the pericentromeric heterochromatin region of the long arm of chromosome 6 because of its very tight genetic linkage (approx. 1 cM) to the markers Aps-1 (Aci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::459c664749e0a4262fcb49370ad2468d
https://research.wur.nl/en/publications/fish-to-meiotic-pachytene-chromosomes-of-tomato-locates-the-root-
https://research.wur.nl/en/publications/fish-to-meiotic-pachytene-chromosomes-of-tomato-locates-the-root-
Autor:
Valerie M. Williamson, Stephen B. Milligan, Pim Zabel, Jafar Yaghoobi, Isgouhi Kaloshian, John Bodeau
Publikováno v:
The Plant Cell 10 (1998)
The Plant Cell, 10, 1307-1319
The Plant Cell, 10, 1307-1319
The Mi locus of tomato confers resistance to root knot nematodes. Tomato DNA spanning the locus was isolated as bacterial artificial chromosome clones, and 52 kb of contiguous DNA was sequenced. Three open reading frames were identified with similari
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4e4e1aa2147f94e35ff7c4bca2b47aa2
https://research.wur.nl/en/publications/the-root-knot-nematode-resistance-gene-mi-from-tomato-is-a-member
https://research.wur.nl/en/publications/the-root-knot-nematode-resistance-gene-mi-from-tomato-is-a-member
Autor:
John Bodeau, Adam Harris, Kathleen M. Perry, Lawrence E. Heisler, Robert P. St.Onge, Corey Nislow, Nader Pourmand, Eveline Farias-Hesson, Guri Giaever, Andrew M. Smith, Iain M. Wallace
Publikováno v:
Nucleic Acids Research
Next-generation sequencing has proven an extremely effective technology for molecular counting applications where the number of sequence reads provides a digital readout for RNA-seq, ChIP-seq, Tn-seq and other applications. The extremely large number
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::825f4337740b0082b827c109151a7ae3
https://doi.org/10.1093/nar/gkq368
https://doi.org/10.1093/nar/gkq368