Zobrazeno 1 - 10 of 49 pro vyhledávání: '"Johansson, Anna C. V."'
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Akademický článek
Comparison of sequencing data processing pipelines and application to underrepresented African human populations.
Autor: Breton, Gwenna1 (AUTHOR) gwenna.breton@ebc.uu.se, Johansson, Anna C. V.2 (AUTHOR), Sjödin, Per1 (AUTHOR), Schlebusch, Carina M.1,3,4 (AUTHOR), Jakobsson, Mattias1,3,4 (AUTHOR) mattias.jakobsson@ebc.uu.se
Publikováno v: BMC Bioinformatics. 10/9/2021, Vol. 22 Issue 1, p1-24. 24p.
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2
Akademický článek
Protein Contents in Biological Membranes Can Explain Abnormal Solvation of Charged and Polar Residues
Autor: Johansson, Anna C. V., Lindahl, Erik, Levitt, Michael
Publikováno v: Proceedings of the National Academy of Sciences of the United States of America, 2009 Sep . 106(37), 15684-15689.
Externí odkaz: https://www.jstor.org/stable/40484783
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3
Copy number determination of the gene for the human pancreatic polypeptide receptor NPY4R using read depth analysis and droplet digital PCR
Autor: Shebanits, Kateryna, Günther, Torsten, Johansson, Anna C. V., Maqbool, Khurram, Feuk, Lars, Jakobsson, Mattias, Larhammar, Dan
Publikováno v: BMC Biotechnology, Vol 19, Iss 1, Pp 1-8 (2019)
BMC Biotechnology
Background Copy number variation (CNV) plays an important role in human genetic diversity and has been associated with multiple complex disorders. Here we investigate a CNV on chromosome 10q11.22 that spans NPY4R, the gene for the appetite-regulating
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::7211f7f48f111843fc7a6a8bbddccfe2
http://link.springer.com/article/10.1186/s12896-019-0523-9
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4
Additional file 5 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 5. Most variants are common to ���BP2019���, ���BP2015��� and ���3mask��� after applying an accessibility mask. Venn diagrams of the variants obtained by three processing pipelines, when restricting
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::62527a3a8d3887e71056e333421dc843
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5
Additional file 8 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 8. Box plots of the percentage of known simple indels by individual, according to ancestry or dataset. Percentage of known simple indels (relative to dbSNP v.151) in ���BP2019��� (before VQSR). A-Individuals are grouped by
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1532118e4678d88c1bec0e0f9c3d21aa
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6
Additional file 1 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 1. Comparison of high coverage whole genome processing pipelines in 29 studies. Extended description of the high coverage whole genome processing pipelines summarized in Main Table 1
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a78f6ef69253a8865e7339f49c4f412
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7
Additional file 9 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 9. Genome coverage is a function of average sequencing depth. Percentage of the genome covered by at least 15X per individual in ���BP2019���, against the average sequencing depth. Dots are coloured by ancestry
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::30ec3389af397d36fb89752ddb4575ef
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9
Additional file 6 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 6. Differences in number of indels per individual are explained by dataset rather than ancestry. Boxplots of the difference between the number of indels (simple and complex) per individual in ���3mask��� and ���BP201
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5013303fafa6bd51cf72245c206d7dab
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10
Additional file 7 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 7. Box plots of the percentage of known biallelic SNPs by individual, according to ancestry or dataset. Percentage of known biallelic SNPs (relative to dbSNP v.151) in ���BP2019��� (before VQSR). A-Individuals are grouped
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e6fe2d781cea0a121d6b73684028e78
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