Zobrazeno 1 - 10
of 40
pro vyhledávání: '"Johanna McEntyre"'
Autor:
Xiao Yang, Shyamasree Saha, Aravind Venkatesan, Santosh Tirunagari, Vid Vartak, Johanna McEntyre
Publikováno v:
Scientific Data, Vol 10, Iss 1, Pp 1-13 (2023)
Abstract Named entity recognition (NER) is a widely used text-mining and natural language processing (NLP) subtask. In recent years, deep learning methods have superseded traditional dictionary- and rule-based NER approaches. A high-quality dataset i
Externí odkaz:
https://doaj.org/article/347015f2f46240ab83f62dc796ead0c5
Publikováno v:
Journal of Biomedical Semantics, Vol 8, Iss 1, Pp 1-9 (2017)
Abstract Background We present the Europe PMC literature component of Open Targets - a target validation platform that integrates various evidence to aid drug target identification and validation. The component identifies target-disease associations
Externí odkaz:
https://doaj.org/article/a49180f6b76c4f318bf117026c1063a4
Autor:
Aravind Venkatesan, Jee-Hyub Kim, Francesco Talo, Michele Ide-Smith, Julien Gobeill, Jacob Carter, Riza Batista-Navarro, Sophia Ananiadou, Patrick Ruch, Johanna McEntyre
Publikováno v:
Wellcome Open Research, Vol 1 (2017)
The tremendous growth in biological data has resulted in an increase in the number of research papers being published. This presents a great challenge for scientists in searching and assimilating facts described in those papers. Particularly, biologi
Externí odkaz:
https://doaj.org/article/c9238a34e1f84b9aaa2f7338e032422b
Autor:
David Bousfield, Johanna McEntyre, Sameer Velankar, George Papadatos, Alex Bateman, Guy Cochrane, Jee-Hyub Kim, Florian Graef, Vid Vartak, Blaise Alako, Niklas Blomberg
Publikováno v:
F1000Research, Vol 5 (2016)
Data from open access biomolecular data resources, such as the European Nucleotide Archive and the Protein Data Bank are extensively reused within life science research for comparative studies, method development and to derive new scientific insights
Externí odkaz:
https://doaj.org/article/ba315dd60fc84299bb6ab9d22cfd5c22
Autor:
Philip E Bourne, Johanna McEntyre
Publikováno v:
PLoS Computational Biology, Vol 2, Iss 10, p e142 (2006)
Externí odkaz:
https://doaj.org/article/99c06a890b9c4afa9dd06489fd488c60
Autor:
Matthew Thakur, Alex Bateman, Cath Brooksbank, Mallory Freeberg, Melissa Harrison, Matthew Hartley, Thomas Keane, Gerard Kleywegt, Andrew Leach, Mariia Levchenko, Sarah Morgan, Ellen M McDonagh, Sandra Orchard, Irene Papatheodorou, Sameer Velankar, Juan Antonio Vizcaino, Rick Witham, Barbara Zdrazil, Johanna McEntyre
Publikováno v:
Nucleic Acids Research. 51:D9-D17
The European Molecular Biology Laboratory's European Bioinformatics Institute (EMBL-EBI) is one of the world's leading sources of public biomolecular data. Based at the Wellcome Genome Campus in Hinxton, UK, EMBL-EBI is one of six sites of the Europe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d6d356dae14a4273b8ee38d9e26e35ca
https://doi.org/10.1093/nar/gkac1098
https://doi.org/10.1093/nar/gkac1098
Autor:
Jose Santiago Sanchez Fragoso, Joel David Rogers, Alexander B Rogers, Maaly Nassar, Johanna McEntyre, Martin Welch, Florian Hollfelder, Robert D Finn
Natural products (bio)synthesised by microbes are an important component of the pharmacopeia with a vast array of biomedical applications, in addition to their key role in many ecological interactions. One approach for the discovery of these metaboli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c51fcb2424162e76103f62e9f62d016f
https://doi.org/10.1101/2023.05.23.540769
https://doi.org/10.1101/2023.05.23.540769
Autor:
Summer Rosonovski, Maria Levchenko, Michele Bridget Ide-Smith, Lynne Faulk, Melissa Harrison, Johanna McEntyre
In the field of life sciences there is a growing need for literature analysis tools that help scientists tackle information overload. Europe PMC is an open access database of over 41 million life science publications and preprints, enriched with supp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fad36f970b8746faced4548a2283a082
https://doi.org/10.31222/osf.io/jfqza
https://doi.org/10.31222/osf.io/jfqza
Autor:
Gaia Cantelli, Rahuman S Malik-Sheriff, Paul Flicek, Ewan Birney, Cath Brooksbank, Alex Bateman, Johanna McEntyre, Anton I. Petrov, Henning Hermjakob, Michele Ide-Smith, Rolf Apweiler
Publikováno v:
Nucleic Acids Research
The European Bioinformatics Institute (EMBL-EBI) maintains a comprehensive range of freely available and up-to-date molecular data resources, which includes over 40 resources covering every major data type in the life sciences. This year's service up
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6056bf19985eb6f26d44e3b8a12f8266
http://europepmc.org/articles/PMC8690175
http://europepmc.org/articles/PMC8690175
Autor:
Chris Morris, Robert Firth, Aravind Venkatesan, Sameer Velankar, Johanna McEntyre, Francesco Talo, Abhik Mukhopadhyay
Publikováno v:
Acta Crystallographica Section F Structural Biology Communications
Acta Crystallogr F Struct Biol Commun
Acta Crystallogr F Struct Biol Commun
This work presents an annotation tool that automatically locates mentions of particular amino-acid residues in published papers and identifies the protein concerned. These matches can be provided in context or in a searchable format in order for rese
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f2eebee5c71e31c7a9c3fc3eda37811
https://doi.org/10.1107/s2053230x1901210x
https://doi.org/10.1107/s2053230x1901210x