Zobrazeno 1 - 10
of 51
pro vyhledávání: '"Joelle Amselem"'
Autor:
Victoria Dominguez Del Angel, Erik Hjerde, Lieven Sterck, Salvadors Capella-Gutierrez, Cederic Notredame, Olga Vinnere Pettersson, Joelle Amselem, Laurent Bouri, Stephanie Bocs, Christophe Klopp, Jean-Francois Gibrat, Anna Vlasova, Brane L. Leskosek, Lucile Soler, Mahesh Binzer-Panchal, Henrik Lantz
Publikováno v:
F1000Research, Vol 7 (2018)
As a part of the ELIXIR-EXCELERATE efforts in capacity building, we present here 10 steps to facilitate researchers getting started in genome assembly and genome annotation. The guidelines given are broadly applicable, intended to be stable over time
Externí odkaz:
https://doaj.org/article/31b54ead9d224544868b3b5e8bfc3fe0
Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.
Autor:
Joelle Amselem, Christina A Cuomo, Jan A L van Kan, Muriel Viaud, Ernesto P Benito, Arnaud Couloux, Pedro M Coutinho, Ronald P de Vries, Paul S Dyer, Sabine Fillinger, Elisabeth Fournier, Lilian Gout, Matthias Hahn, Linda Kohn, Nicolas Lapalu, Kim M Plummer, Jean-Marc Pradier, Emmanuel Quévillon, Amir Sharon, Adeline Simon, Arjen ten Have, Bettina Tudzynski, Paul Tudzynski, Patrick Wincker, Marion Andrew, Véronique Anthouard, Ross E Beever, Rolland Beffa, Isabelle Benoit, Ourdia Bouzid, Baptiste Brault, Zehua Chen, Mathias Choquer, Jérome Collémare, Pascale Cotton, Etienne G Danchin, Corinne Da Silva, Angélique Gautier, Corinne Giraud, Tatiana Giraud, Celedonio Gonzalez, Sandrine Grossetete, Ulrich Güldener, Bernard Henrissat, Barbara J Howlett, Chinnappa Kodira, Matthias Kretschmer, Anne Lappartient, Michaela Leroch, Caroline Levis, Evan Mauceli, Cécile Neuvéglise, Birgitt Oeser, Matthew Pearson, Julie Poulain, Nathalie Poussereau, Hadi Quesneville, Christine Rascle, Julia Schumacher, Béatrice Ségurens, Adrienne Sexton, Evelyn Silva, Catherine Sirven, Darren M Soanes, Nicholas J Talbot, Matt Templeton, Chandri Yandava, Oded Yarden, Qiandong Zeng, Jeffrey A Rollins, Marc-Henri Lebrun, Marty Dickman
Publikováno v:
PLoS Genetics, Vol 7, Iss 8, p e1002230 (2011)
Sclerotinia sclerotiorum and Botrytis cinerea are closely related necrotrophic plant pathogenic fungi notable for their wide host ranges and environmental persistence. These attributes have made these species models for understanding the complexity o
Externí odkaz:
https://doaj.org/article/596e393c52ef4f4a9f4c7467407fb315
Autor:
Reda Amezrou, Aurélie Ducasse, Jérôme Compain, Nicolas Lapalu, Anais Pitarch, Laetitia Dupont, Johann Confais, Henriette Goyeau, Gert H. J. Kema, Daniel Croll, Joëlle Amselem, Andrea Sanchez-Vallet, Thierry C. Marcel
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-14 (2024)
Abstract Knowledge of genetic determinism and evolutionary dynamics mediating host-pathogen interactions is essential to manage fungal plant diseases. Studies on the genetic architecture of fungal pathogenicity often focus on large-effect effector ge
Externí odkaz:
https://doaj.org/article/4b9a01caa8de4ff1878cd3da604202ac
Autor:
Martine Maïbèche, Hélène Boulain, Christophe Bressac, Laure Kaiser, Emma Persyn, Valérie Barbe, Anthony Bretaudeau, Martial Marbouty, Bernard Duvic, Georges Periquet, Annie Bézier, Lyam Baudry, Jean-Marc Aury, Mahnaz Sabeti-Azad, Géraldine Dubreuil, Karine Labadie, Fernando Luis Cônsoli, Benjamin Noel, Frédérique Hilliou, Thomas Chertemps, Elisabeth A. Herniou, Mohamed Amine Chebbi, Fabrice Legeai, Jérémy Gauthier, Jetske G. de Boer, Nicolas Montagné, Joelle Amselem, Jean-Michel Drezen, Thibaut Josse, Sébastien J. M. Moreau, Sven Warris, Louise E. M. Vet, Isabelle Boulogne, Myriam Harry, Diane Bigot, Elisabeth Huguet, Karine Musset, Natacha Kremer, Claire Capdevielle-Dulac, Joke J.F.A. van Vugt, James B. Whitfield, Aurélie Hua-Van, Hans M. Smid, Gaëlle Le Goff, Romain Koszul, Bruna Laís Merlin, Stéphane Dupas, Isabelle Luyten, Philippe Gayral, Emmanuelle Jacquin-Joly, David Siaussat
Publikováno v:
Communications Biology
Communications Biology, Vol 4, Iss 1, Pp 1-1 (2021)
Communications Biology, Vol 4, Iss 1, Pp 1-1 (2021)
Endogenous viruses form an important proportion of eukaryote genomes and a source of novel functions. How large DNA viruses integrated into a genome evolve when they confer a benefit to their host, however, remains unknown. Bracoviruses are essential
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eaf1b3859c1a56336047bc462a2dd22c
https://doi.org/10.1038/s42003-021-02480-9
https://doi.org/10.1038/s42003-021-02480-9
Autor:
Igor V. Grigoriev, Alessandra Salvioli di Fossalunga, Joelle Amselem, Xie Xianan, Anna Lipzen, Bernard Henrissat, Paola Bonfante, Stefano Ghignone, Kinga Sędzielewska Toro, Mara Novero, Emmanuelle Morin, Francis Martin, Francesco Venice
Publikováno v:
Environmental microbiology
22 (2020): 122–141. doi:10.1111/1462-2920.14827
info:cnr-pdr/source/autori:Venice F., Ghignone S., Salvioli di Fossalunga A., Amselem J., Novero M., Xianan X., Sedzielewska Toro K., Morin E., Lipzen A., Grigoriev I. V., Henrissat B., Martin F. M., Bonfante, P./titolo:At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions/doi:10.1111%2F1462-2920.14827/rivista:Environmental microbiology (Print)/anno:2020/pagina_da:122/pagina_a:141/intervallo_pagine:122–141/volume:22
Environmental Microbiology
Environmental Microbiology, 2020, 22 (1), pp.122-141. ⟨10.1111/1462-2920.14827⟩
Environmental microbiology, vol 22, iss 1
Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2020, 22 (1), pp.122-141. ⟨10.1111/1462-2920.14827⟩
22 (2020): 122–141. doi:10.1111/1462-2920.14827
info:cnr-pdr/source/autori:Venice F., Ghignone S., Salvioli di Fossalunga A., Amselem J., Novero M., Xianan X., Sedzielewska Toro K., Morin E., Lipzen A., Grigoriev I. V., Henrissat B., Martin F. M., Bonfante, P./titolo:At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions/doi:10.1111%2F1462-2920.14827/rivista:Environmental microbiology (Print)/anno:2020/pagina_da:122/pagina_a:141/intervallo_pagine:122–141/volume:22
Environmental Microbiology
Environmental Microbiology, 2020, 22 (1), pp.122-141. ⟨10.1111/1462-2920.14827⟩
Environmental microbiology, vol 22, iss 1
Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2020, 22 (1), pp.122-141. ⟨10.1111/1462-2920.14827⟩
Contract DE-AC02-05CH11231 - Laboratory of Excellence ARBRE (ANR-11- LABX-0002-01), Region Lorraine, European Regional Development Fund and Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forest University; Internati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a64928a126f197c28a2a89d5e2dc0efb
https://doi.org/10.1111/1462-2920.14827
https://doi.org/10.1111/1462-2920.14827
Autor:
Myriam Harry, Bernard Duvic, Anthony Bretaudeau, Hélène Boulain, Jetske G. de Boer, Jean-Marc Aury, Claire Capdevielle-Dulac, Annie Bézier, Diane Bigot, Natacha Kremer, Laure Kaiser, Lyam Baudry, Joke J.F.A. van Vugt, Jean-Michel Drezen, Georges Periquet, Stéphane Dupas, Romain Koszul, Aurélie Hua-Van, Jérémy Gauthier, Fabrice Legeai, Emma Persyn, Mahnaz Sabeti-Azad, Fernando Luis Cônsoli, Valérie Barbe, Joelle Amselem, Karine Labadie, Benjamin Noel, Frédérique Hilliou, Martine Maïbèche, Géraldine Dubreuil, Isabelle Luyten, Karine Musset, Martial Marbouty, Christophe Bressac, Isabelle Boulogne, Louise E. M. Vet, Thibaut Josse, Philippe Gayral, Hans M. Smid, Emmanuelle Jacquin-Joly, David Siaussat, James B. Whitfield, Elisabeth A. Herniou, Mohamed Amine Chebbi, Thomas Chertemps, Nicolas Montagné, Sébastien J. M. Moreau, Elisabeth Huguet, Bruna Laís Merlin, Gaëlle Le Goff, Sven Warris
Publikováno v:
Communications Biology
Communications Biology, Nature Publishing Group, 2021, 4 (1), pp.1-15. ⟨10.1038/s42003-020-01623-8⟩
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Communications Biology, Vol 4, Iss 1, Pp 1-15 (2021)
Communications Biology, 2021, 4 (1), pp.1-15. ⟨10.1038/s42003-020-01623-8⟩
Communications biology, 4(1):104. Nature Publishing Group
Communications Biology, 4(1)
Communications Biology, 4(1). Nature Research
Communications Biology 4 (2021) 1
Communications Biology, Nature Publishing Group, 2021, 4 (1), pp.1-15. ⟨10.1038/s42003-020-01623-8⟩
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Communications Biology, Vol 4, Iss 1, Pp 1-15 (2021)
Communications Biology, 2021, 4 (1), pp.1-15. ⟨10.1038/s42003-020-01623-8⟩
Communications biology, 4(1):104. Nature Publishing Group
Communications Biology, 4(1)
Communications Biology, 4(1). Nature Research
Communications Biology 4 (2021) 1
Endogenous viruses form an important proportion of eukaryote genomes and a source of novel functions. How large DNA viruses integrated into a genome evolve when they confer a benefit to their host, however, remains unknown. Bracoviruses are essential
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fa20eb6c7354115f5af05cb96770c0a2
https://hal.archives-ouvertes.fr/hal-03127732/document
https://hal.archives-ouvertes.fr/hal-03127732/document
Autor:
Joelle Amselem, Kévin Gazengel, Anne-Yvonne Guillerm-Erckelboudt, Lionel Lebreton, Denis Tagu, Nicolas Lapalu, Stéphanie Daval
Publikováno v:
PLoS ONE
PLoS ONE, Public Library of Science, 2020, 15 (7), pp.e0236429. ⟨10.1371/journal.pone.0236429⟩
PLoS ONE, 2020, 15 (7), pp.e0236429. ⟨10.1371/journal.pone.0236429⟩
PLoS ONE, Vol 15, Iss 7, p e0236429 (2020)
PLoS ONE, Public Library of Science, 2020, 15 (7), pp.e0236429. ⟨10.1371/journal.pone.0236429⟩
PLoS ONE, 2020, 15 (7), pp.e0236429. ⟨10.1371/journal.pone.0236429⟩
PLoS ONE, Vol 15, Iss 7, p e0236429 (2020)
The soilborne fungus Gaeumannomyces graminis var. tritici (Ggt) causes the take-all disease on wheat roots. Ambient pH has been shown to be critical in different steps of Ggt life cycle such as survival in bulk soil, saprophytic growth, and pathogeni
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ede9b3de57c28f49926490e5d38b7963
https://pubmed.ncbi.nlm.nih.gov/32730288
https://pubmed.ncbi.nlm.nih.gov/32730288
Autor:
Mélanie Sannier, Jérôme Collemare, Robert Debuchy, Spencer Brown, Christophe Lemaire, Jérôme Gouzy, Bruno Le Cam, Bouchez Olivier, Jason Shiller, Marie Noëlle Bellanger, Daniel Sargent, Thibaut Payen, Ludovic Duvaux, Joelle Amselem, Marie De Gracia, Valérie Caffier
Publikováno v:
G3
G3, Genetics Society of America, 2019, 9 (8), pp.2405-2414. ⟨10.1534/g3.119.400047⟩
G3, Genetics Society of America, 2019, ⟨10.1534/g3.119.400047⟩
G3: Genes, Genomes, Genetics, Vol 9, Iss 8, Pp 2405-2414 (2019)
G3: Genes, Genomes, Genetics, 9(8), 2405-2414. Genetics Society of America
G3, 2019, 9 (8), pp.2405-2414. ⟨10.1534/g3.119.400047⟩
G3, Genetics Society of America, 2019, 9 (8), pp.2405-2414. ⟨10.1534/g3.119.400047⟩
G3, Genetics Society of America, 2019, ⟨10.1534/g3.119.400047⟩
G3: Genes, Genomes, Genetics, Vol 9, Iss 8, Pp 2405-2414 (2019)
G3: Genes, Genomes, Genetics, 9(8), 2405-2414. Genetics Society of America
G3, 2019, 9 (8), pp.2405-2414. ⟨10.1534/g3.119.400047⟩
TheVenturiagenus comprises fungal species that are pathogens onRosaceaehost plants, includingV. inaequalisandV. asperataon apple,V. aucupariaeon sorbus andV. pirinaon pear. Although the genetic structure ofV. inaequalispopulations has been investigat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2f68e7a90cfc04e955e65f873e1d44f
http://hdl.handle.net/20.500.12278/108734
http://hdl.handle.net/20.500.12278/108734
Autor:
Hadi Quesneville, Joelle Amselem, Cyril Pommier, Thomas Letellier, Isabelle Luyten, Françoise Alfama-Depauw, Nathalie Choisne, Guillaume Cornut, Anne-Françoise Adam-Blondon, Michael Alaux, Véronique Jamilloux, Florian Maumus
Publikováno v:
Mobile DNA
Mobile DNA, BioMed Central, 2019, 10, pp.1-8. ⟨10.1186/s13100-019-0150-y⟩
Mobile DNA, Vol 10, Iss 1, Pp 1-8 (2019)
Mobile DNA (10), 1-8. (2019)
Mobile DNA, BioMed Central, 2019, 10, pp.1-8. ⟨10.1186/s13100-019-0150-y⟩
Mobile DNA, Vol 10, Iss 1, Pp 1-8 (2019)
Mobile DNA (10), 1-8. (2019)
Software; International audience; Background: Thanks to their ability to move around and replicate within genomes, transposable elements (TEs) are perhaps the most important contributors to genome plasticity and evolution. Their detection and annotat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ef9309e6efaab65f46433c34ba7b88cf
https://hal.inrae.fr/hal-02625212/document
https://hal.inrae.fr/hal-02625212/document
Autor:
Isabelle Luyten, Joelle Amselem, Guillaume Morgant, Muriel Viaud, Jean-Marc Pradier, Javier Moraga, Adeline Simon, Isidro G. Collado, Bérengère Dalmais, Antoine Porquier
Publikováno v:
Fungal Genetics and Biology 96 (2016) 33–46
Fungal Genetics and Biology
Fungal Genetics and Biology, Elsevier, 2016, 96 (Nov 2016), pp.33-46. ⟨10.1016/j.fgb.2016.10.003⟩
Fungal Genetics and Biology
Fungal Genetics and Biology, Elsevier, 2016, 96 (Nov 2016), pp.33-46. ⟨10.1016/j.fgb.2016.10.003⟩
Botrydial (BOT) is a non-host specific phytotoxin produced by the polyphagous phytopathogenic fungus Botrytis cinerea. The genomic region of the BOT biosynthetic gene cluster was investigated and revealed two additional genes named Bcbot6 and Bcbot7.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36005e342ea5837912828c2e7897bf34
https://doi.org/10.1016/j.fgb.2016.10.003
https://doi.org/10.1016/j.fgb.2016.10.003