Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Joel Weiser"'
Autor:
Parul Gupta, Sushma Naithani, Marcela Karey Tello-Ruiz, Kapeel Chougule, Peter D’Eustachio, Antonio Fabregat, Yinping Jiao, Maria Keays, Young Koung Lee, Sunita Kumari, Joseph Mulvaney, Andrew Olson, Justin Preece, Joshua Stein, Sharon Wei, Joel Weiser, Laura Huerta, Robert Petryszak, Paul Kersey, Lincoln D. Stein, Doreen Ware, Pankaj Jaiswal
Publikováno v:
Current Plant Biology, Vol 7, Iss C, Pp 10-15 (2016)
Gramene (http://www.gramene.org) is an online, open source, curated resource for plant comparative genomics and pathway analysis designed to support researchers working in plant genomics, breeding, evolutionary biology, system biology, and metabolic
Externí odkaz:
https://doaj.org/article/0f7c782522d6498da25a5265c6d06c93
Autor:
Karen Rothfels, Marija Milacic, Lisa Matthews, Robin Haw, Cristoffer Sevilla, Marc Gillespie, Ralf Stephan, Chuqiao Gong, Eliot Ragueneau, Bruce May, Veronica Shamovsky, Adam Wright, Joel Weiser, Deidre Beavers, Patrick Conley, Krishna Tiwari, Bijay Jassal, Johannes Griss, Andrea Senff‐Ribeiro, Timothy Brunson, Robert Petryszak, Henning Hermjakob, Peter D'Eustachio, Guanming Wu, Lincoln Stein
Publikováno v:
Current Protocols. 3
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::31e84af42c769746cb058f4c053d0ad4
https://doi.org/10.1002/cpz1.722
https://doi.org/10.1002/cpz1.722
Autor:
Johannes Griss, Liam Beckman, Cristoffer Sevilla, Lisa Matthews, Solomon Shorser, Julieth Murillo, Chris Sander, Joel Weiser, Ralf Stephan, Konstantinos Sidiropoulos, Chuan Deng, Marija Milacic, Thawfeek M. Varusai, Veronica Shamovsky, Antonio Fabregat, Xiang Shao, Bruce May, Justin Cook, Robin Haw, Nasim Sanati, Emek Demir, Guanming Wu, Gary D. Bader, Karen Rothfels, Chuqiao Gong, Henning Hermjakob, Timothy Brunson, Peter D'Eustachio, Bijay Jassal, Andrea Senff-Ribeiro, Guilherme Viteri, Marc Gillespie, Lincoln Stein, Yusra Haider, Eliot Ragueneau
Publikováno v:
Nucleic Acids Research
The Reactome Knowledgebase (https://reactome.org), an Elixir core resource, provides manually curated molecular details across a broad range of physiological and pathological biological processes in humans, including both hereditary and acquired dise
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6b6e9fc9b5c93b4fd446c1fe5dd6f31b
https://doi.org/10.1093/nar/gkab1028
https://doi.org/10.1093/nar/gkab1028
Autor:
Adam J, Wright, Marija, Orlic-Milacic, Karen, Rothfels, Joel, Weiser, Quang M, Trinh, Bijay, Jassal, Robin A, Haw, Lincoln D, Stein
Publikováno v:
Database. 2022
Abstract Reactome is a database of human biological pathways manually curated from the primary literature and peer-reviewed by experts. To evaluate the utility of Reactome pathways for predicting functional consequences of genetic perturbations, we c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2ba9a32dba69bf1be7ea5e88ee1a234
https://doi.org/10.1093/database/baac009
https://doi.org/10.1093/database/baac009
Autor:
Henning Hermjakob, Guilherme Viteri, Justin Cook, Guanming Wu, Lisa Matthews, Antonio Fabregat, Thawfeek M. Varusai, Konstantinos Sidiropoulos, Marija Milacic, Robin Haw, Solomon Shorser, Peter D'Eustachio, Joel Weiser, Lincoln Stein, Marc Gillespie
Publikováno v:
Database: The Journal of Biological Databases and Curation
Reactome is a manually curated, open-source, open-data knowledge base of biomolecular pathways. Reactome has always provided clear credit attribution for authors, curators and reviewers through fine-grained annotation of all three roles at the reacti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ad6f8ba2d13578f4425247e09777e352
https://pubmed.ncbi.nlm.nih.gov/31802127
https://pubmed.ncbi.nlm.nih.gov/31802127
Autor:
Paul J. Kersey, Yinping Jiao, Robert Petryszak, Joshua C. Stein, Lincoln D. Stein, Doreen Ware, Antonio Fabregat, Sunita Kumari, Kapeel Chougule, Justin Preece, Laura Huerta, Peter D'Eustachio, Sharon Wei, Parul Gupta, Sushma Naithani, Andrew Olson, Pankaj Jaiswal, Maria Keays, Joel Weiser, Young Koung Lee, Marcela K. Tello-Ruiz, Joseph Mulvaney
Publikováno v:
Current Plant Biology, Vol 7, Iss C, Pp 10-15 (2016)
Gramene (http://www.gramene.org) is an online, open source, curated resource for plant comparative genomics and pathway analysis designed to support researchers working in plant genomics, breeding, evolutionary biology, system biology, and metabolic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0101dfe0b2c991af0cbf7cbc4ea579be
Autor:
Lincoln D. Stein, Pankaj Jaiswal, Dan Bolser, Parul Gupta, Guy Naamati, Sunita Kumari, Crispin B. Taylor, Kapeel Chougule, Antonio Fabregat, Nuno A. Fonseca, Alfonso Muñoz-Pomer Fuentes, Joseph Mulvaney, James Thomason, Noor Al-Bader, Yinping Jiao, Robert Petryszak, Electra Tapanari, Y. Amy Tang, Paul J. Kersey, Justin Preece, Matthew Geniza, Haider Iqbal, Patti Lockhart, Bo Wang, Young Koung Lee, Doreen Ware, Sushma Naithani, Peter D'Eustachio, Laura Huerta, Vivek Kumar, Sharon Wei, Justin Elser, Marcela K. Tello-Ruiz, Irene Papatheodorou, Andrew Olson, Maria Keays, Joel Weiser, Michael S. Campbell, Joshua C. Stein
Publikováno v:
Nucleic Acids Research
Gramene (http://www.gramene.org) is a knowledgebase for comparative functional analysis in major crops and model plant species. The current release, #54, includes over 1.7 million genes from 44 reference genomes, most of which were organized into 62,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::db3770996f896ce84c8d6494666a1f0e
https://pubmed.ncbi.nlm.nih.gov/29165610
https://pubmed.ncbi.nlm.nih.gov/29165610
Autor:
Antonio Fabregat, Steven Jupe, Lisa Matthews, Konstantinos Sidiropoulos, Marc Gillespie, Phani Garapati, Robin Haw, Bijay Jassal, Florian Korninger, Bruce May, Marija Milacic, Corina Duenas Roca, Karen Rothfels, Cristoffer Sevilla, Veronica Shamovsky, Solomon Shorser, Thawfeek Varusai, Guilherme Viteri, Joel Weiser, Guanming Wu, Lincoln Stein, Henning Hermjakob, Peter D’Eustachio
Publikováno v:
Europe PubMed Central
Nucleic Acids Research
Nucleic Acids Research
The Reactome Knowledgebase (https://reactome.org) provides molecular details of signal transduction, transport, DNA replication, metabolism and other cellular processes as an ordered network of molecular transformations in a single consistent data mo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b135fd65ce5098310be101e9e9b408ca
https://doi.org/10.1093/nar/gkt1102
https://doi.org/10.1093/nar/gkt1102
Autor:
Antonio Fabregat, Maria Keays, Lincoln D. Stein, Peter D'Eustachio, Palitha Dharmawardhana, Parul Gupta, Joel Weiser, Pankaj Jaiswal, Alfonso Muñoz-Pomer Fuentes, Guanming Wu, Sushma Naithani, Justin Elser, Justin Preece, Vindhya Amarasinghe, Robert Petryszak, Doreen Ware
Publikováno v:
Nucleic Acids Research
Plant Reactome (http://plantreactome.gramene.org/) is a free, open-source, curated plant pathway database portal, provided as part of the Gramene project. The database provides intuitive bioinformatics tools for the visualization, analysis and interp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb4146cbb521497e77d6f52272fcbb5f
https://pubmed.ncbi.nlm.nih.gov/27799469
https://pubmed.ncbi.nlm.nih.gov/27799469
Publikováno v:
Nat Methods
Pathway-based interpretation of gene lists is a staple of genome analysis. It depends on frequently updated gene annotation databases. We analyzed the evolution of gene annotations over the past seven years and found that the vocabulary of pathways a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fef064012fc996640399ef5498cf7bb6
https://europepmc.org/articles/PMC7802636/
https://europepmc.org/articles/PMC7802636/
