Zobrazeno 1 - 10
of 27
pro vyhledávání: '"Joel Sevinsky"'
Autor:
Nicholas F G Chen, Chrispin Chaguza, Luc Gagne, Matthew Doucette, Sandra Smole, Erika Buzby, Joshua Hall, Stephanie Ash, Rachel Harrington, Seana Cofsky, Selina Clancy, Curtis J Kapsak, Joel Sevinsky, Kevin Libuit, Daniel J Park, Peera Hemarajata, Jacob M Garrigues, Nicole M Green, Sean Sierra-Patev, Kristin Carpenter-Azevedo, Richard C Huard, Claire Pearson, Kutluhan Incekara, Christina Nishimura, Jian Ping Huang, Emily Gagnon, Ethan Reever, Jafar Razeq, Anthony Muyombwe, Vítor Borges, Rita Ferreira, Daniel Sobral, Silvia Duarte, Daniela Santos, Luís Vieira, João Paulo Gomes, Carly Aquino, Isabella M Savino, Karinda Felton, Moneeb Bajwa, Nyjil Hayward, Holly Miller, Allison Naumann, Ria Allman, Neel Greer, Amary Fall, Heba H Mostafa, Martin P McHugh, Daniel M Maloney, Rebecca Dewar, Juliet Kenicer, Abby Parker, Katharine Mathers, Jonathan Wild, Seb Cotton, Kate E Templeton, George Churchwell, Philip A Lee, Maria Pedrosa, Brenna McGruder, Sarah Schmedes, Matthew R Plumb, Xiong Wang, Regina Bones Barcellos, Fernanda M S Godinho, Richard Steiner Salvato, Aimee Ceniseros, Mallery I Breban, Nathan D Grubaugh, Glen R Gallagher, Chantal B F Vogels
Publikováno v:
PLoS Biology, Vol 21, Iss 6, p e3002151 (2023)
The 2022 multicountry mpox outbreak concurrent with the ongoing Coronavirus Disease 2019 (COVID-19) pandemic further highlighted the need for genomic surveillance and rapid pathogen whole-genome sequencing. While metagenomic sequencing approaches hav
Externí odkaz:
https://doaj.org/article/f6624948d6784e6da2c1bd198855dab0
Autor:
Jared Lumpe, Lynette Gumbleton, Andrew Gorzalski, Kevin Libuit, Vici Varghese, Tyler Lloyd, Farid Tadros, Tyler Arsimendi, Eileen Wagner, Craig Stephens, Joel Sevinsky, David Hess, Mark Pandori
Publikováno v:
PLoS ONE, Vol 18, Iss 2 (2023)
Whole genome sequencing (WGS) of clinical bacterial isolates has the potential to transform the fields of diagnostics and public health. To realize this potential, bioinformatic software that reports identification results needs to be developed that
Externí odkaz:
https://doaj.org/article/a1ddb06295eb4ea2ab9767eb8cc989fc
Autor:
Andrew J. Gorzalski, Heather Kerwin, Subhash Verma, David C. Hess, Joel Sevinsky, Kevin Libuit, Irina Vlasova-St. Louis, Danielle Siao, Lauren Siao, Diego Buñuel, Stephanie Van Hooser, Mark W. Pandori
Publikováno v:
The Journal of Molecular Diagnostics. 25:191-196
Autor:
Nicholas F G, Chen, Chrispin, Chaguza, Luc, Gagne, Matthew, Doucette, Sandra, Smole, Erika, Buzby, Joshua, Hall, Stephanie, Ash, Rachel, Harrington, Seana, Cofsky, Selina, Clancy, Curtis J, Kapsak, Joel, Sevinsky, Kevin, Libuit, Daniel J, Park, Peera, Hemarajata, Jacob M, Garrigues, Nicole M, Green, Sean, Sierra-Patev, Kristin, Carpenter-Azevedo, Richard C, Huard, Claire, Pearson, Kutluhan, Incekara, Christina, Nishimura, Jian Ping, Huang, Emily, Gagnon, Ethan, Reever, Jafar, Razeq, Anthony, Muyombwe, Vítor, Borges, Rita, Ferreira, Daniel, Sobral, Silvia, Duarte, Daniela, Santos, Luís, Vieira, João Paulo, Gomes, Carly, Aquino, Isabella M, Savino, Karinda, Felton, Moneeb, Bajwa, Nyjil, Hayward, Holly, Miller, Allison, Naumann, Ria, Allman, Neel, Greer, Amary, Fall, Heba H, Mostafa, Martin P, McHugh, Daniel M, Maloney, Rebecca, Dewar, Juliet, Kenicer, Abby, Parker, Katharine, Mathers, Jonathan, Wild, Seb, Cotton, Kate E, Templeton, George, Churchwell, Philip A, Lee, Maria, Pedrosa, Brenna, McGruder, Sarah, Schmedes, Matthew R, Plumb, Xiong, Wang, Regina Bones, Barcellos, Fernanda M S, Godinho, Richard Steiner, Salvato, Aimee, Ceniseros, Mallery I, Breban, Nathan D, Grubaugh, Glen R, Gallagher, Chantal B F, Vogels
Publikováno v:
medRxiv : the preprint server for health sciences.
The 2022 multi-country monkeypox outbreak concurrent with the ongoing COVID-19 pandemic has further highlighted the need for genomic surveillance and pathogen whole genome sequencing. While metagenomic sequencing approaches have been used to sequence
Autor:
Nicholas F.G. Chen, Chrispin Chaguza, Luc Gagne, Matthew Doucette, Sandra Smole, Erika Buzby, Joshua Hall, Stephanie Ash, Rachel Harrington, Seana Cofsky, Selina Clancy, Curtis J. Kapsak, Joel Sevinsky, Kevin Libuit, Daniel J. Park, Peera Hemarajata, Jacob M. Garrigues, Nicole M. Green, Sean Sierra-Patev, Kristin Carpenter-Azevedo, Richard C. Huard, Claire Pearson, Kutluhan Incekara, Christina Nishimura, Jian Ping Huang, Emily Gagnon, Ethan Reever, Jafar Razeq, Anthony Muyombwe, Vítor Borges, Rita Ferreira, Daniel Sobral, Silvia Duarte, Daniela Santos, Luís Vieira, João Paulo Gomes, Carly Aquino, Isabella M. Savino, Karinda Felton, Moneeb Bajwa, Nyjil Hayward, Holly Miller, Allison Naumann, Ria Allman, Neel Greer, Amary Fall, Heba H. Mostafa, Martin P. McHugh, Daniel M. Maloney, Rebecca Dewar, Juliet Kenicer, Abby Parker, Katharine Mathers, Jonathan Wild, Seb Cotton, Kate E. Templeton, George Churchwell, Philip A. Lee, Maria Pedrosa, Brenna McGruder, Sarah Schmedes, Matthew R. Plumb, Xiong Wang, Regina Bones Barcellos, Fernanda M.S. Godinho, Richard Steiner Salvato, Aimee Ceniseros, Mallery I. Breban, Nathan D. Grubaugh, Glen R. Gallagher, Chantal B.F. Vogels
The 2022 multi-country monkeypox (mpox) outbreak concurrent with the ongoing COVID-19 pandemic has further highlighted the need for genomic surveillance and rapid pathogen whole genome sequencing. While metagenomic sequencing approaches have been use
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::62c28b583984857d908847dbcd929754
https://doi.org/10.1101/2022.10.14.22280783
https://doi.org/10.1101/2022.10.14.22280783
Autor:
Andrew J. Gorzalski, Christina Boyles, Victoria Sepcic, Subhash Verma, Joel Sevinsky, Kevin Libuit, Stephanie Van Hooser, Mark W. Pandori
Publikováno v:
Diagnostic Microbiology and Infectious Disease. 104:115747
Autor:
Paul D. Hartley, Andrew Gorzalski, Holly Hansen, Subhash C. Verma, Michael A. Picker, David P. AuCoin, Cyprian C. Rossetto, Joel Sevinsky, Erin Buttery, Mark Pandori, Yanji Xu, Richard L. Tillett
Publikováno v:
Journal of Genetics and Genomics
Patients with signs of COVID-19 were tested through diagnostic RT-PCR for SARS-CoV-2 using RNA extracted from the nasopharyngeal/nasal swabs. To determine the variants of SARS-CoV-2 circulating in the state of Nevada, specimens from 200 COVID-19 pati
Autor:
Victoria Sepcic, Joel Sevinsky, Stephanie Van Hooser, Subhash C. Verma, Mark Pandori, Kevin Libuit, Andrew Gorzalski, Christina Boyles
Publikováno v:
SSRN Electronic Journal.
An instance of sequential infection of an individual with, firstly, the Delta variant and secondly a Delta-sub-lineage has been identified. The individual was found positive for the AY.26 lineage 22 days after being found positive for the Delta (B.1.
Autor:
Andrew Gorzalski, Stephanie Van Hooser, Richard L. Tillett, Mark Pandori, Chris Laverdure, Heather Kerwin, Paul D. Hartley, Joel Sevinsky, Subhash C. Verma, Cyprian C. Rossetto, Megan J Farrell, David Jackson, Natalie Crawford
Publikováno v:
The Lancet. Infectious Diseases
The Lancet Infectious Diseases
The Lancet Infectious Diseases
Summary Background The degree of protective immunity conferred by infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is currently unknown. As such, the possibility of reinfection with SARS-CoV-2 is not well understood. We des
SARS-CoV-2 Sequencing on Illumina MiSeq Using ARTIC Protocol: Part 2 - Illumina DNA Flex Protocol v1
Autor:
Joel Sevinsky, Arian Nassiri, Heather Blankenship, Erin Young, Kevin Libuit, Kelly Oakeson, Lauren Turner, StaPH-B Consortium
This protocol is an adaption of several circulating protocols on SARS-CoV-2 sequencing using the ARTIC protocol and the Illumina Nexterra DNA Flex library prep kit. Its purpose is to simplify things for the average state public health laboratory, usi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::07c1c2a609a9b87cb79e7cf628b0ad0f
https://doi.org/10.17504/protocols.io.bffyjjpw
https://doi.org/10.17504/protocols.io.bffyjjpw