Zobrazeno 1 - 10
of 117
pro vyhledávání: '"Joel Berendzen"'
Autor:
Joel Berendzen, Anne V. Brown, Connor T. Cameron, Jacqueline D. Campbell, Alan M. Cleary, Sudhansu Dash, Samuel Hokin, Wei Huang, Scott R. Kalberer, Rex T. Nelson, Sven Redsun, Nathan T. Weeks, Andrew Wilkey, Andrew D. Farmer, Steven B. Cannon
Publikováno v:
Legume Science, Vol 3, Iss 3, Pp n/a-n/a (2021)
Abstract The Legume Information System (LIS; https://legumeinfo.org) houses genetic and genomic data, integrated in various online tools to allow comparative genomic analyses. The website and database maintain data for more than two dozen species, pa
Externí odkaz:
https://doaj.org/article/88581ad44e754a0bae55c177f02a8874
Autor:
Lindsey Jacobs, Benjamin H McMahon, Joel Berendzen, Jonathan Longmire, Cheryl Gleasner, Nicolas W Hengartner, Momchilo Vuyisich, Judith D Cohn, Marti Jenkins, Andrew W Bartlow, Jeanne M Fair
Publikováno v:
PLoS ONE, Vol 15, Iss 3, p e0230738 (2020)
[This corrects the article DOI: 10.1371/journal.pone.0225858.].
Externí odkaz:
https://doaj.org/article/3feee5d20dd4497e83204a2a2151b462
Autor:
Lindsey Jacobs, Benjamin H McMahon, Joel Berendzen, Jonathan Longmire, Cheryl Gleasner, Nicolas W Hengartner, Momchilo Vuyisich, Judith R Cohn, Marti Jenkins, Andrew W Bartlow, Jeanne M Fair
Publikováno v:
PLoS ONE, Vol 14, Iss 12, p e0225858 (2019)
Around the world, scavenging birds such as vultures and condors have been experiencing drastic population declines. Scavenging birds have a distinct digestive process to deal with higher amounts of bacteria in their primary diet of carcasses in varyi
Externí odkaz:
https://doaj.org/article/49fe58ef7ce24f96af058f9af5874175
Autor:
Sven, Redsun, Sam, Hokin, Connor T, Cameron, Alan M, Cleary, Joel, Berendzen, Sudhansu, Dash, Anne V, Brown, Andrew, Wilkey, Jacqueline D, Campbell, Wei, Huang, Scott R, Kalberer, Nathan T, Weeks, Steven B, Cannon, Andrew D, Farmer
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2443
In this chapter, we introduce the main components of the Legume Information System ( https://legumeinfo.org ) and several associated resources. Additionally, we provide an example of their use by exploring a biological question: is there a common mol
Autor:
Sven Redsun, Sam Hokin, Connor T. Cameron, Alan M. Cleary, Joel Berendzen, Sudhansu Dash, Anne V. Brown, Andrew Wilkey, Jacqueline D. Campbell, Wei Huang, Scott R. Kalberer, Nathan T. Weeks, Steven B. Cannon, Andrew D. Farmer
Publikováno v:
Plant Bioinformatics ISBN: 9781071620663
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b3ddb64f2fc0a09f6bf356b0d2f4cbd6
https://doi.org/10.1007/978-1-0716-2067-0_4
https://doi.org/10.1007/978-1-0716-2067-0_4
Autor:
Jessica L. Binder, Joel Berendzen, Amy O. Stevens, Yi He, Jian Wang, Nikolay V. Dokholyan, Tudor I. Oprea
Publikováno v:
Current opinion in structural biology. 74
We investigate the use of confidence scores to evaluate the accuracy of a given AlphaFold (AF2) protein model for drug discovery. Prediction of accuracy is improved by not considering confidence scores below 80 due to the effects of disorder. On a se
Autor:
Mac Brown, Leslie Moore, Benjamin McMahon, Dennis Powell, Montiago LaBute, James M Hyman, Ariel Rivas, Mark Jankowski, Joel Berendzen, Jason Loeppky, Carrie Manore, Jeanne Fair
Publikováno v:
PLoS ONE, Vol 10, Iss 5, p e0124037 (2015)
Determining optimal surveillance networks for an emerging pathogen is difficult since it is not known beforehand what the characteristics of a pathogen will be or where it will emerge. The resources for surveillance of infectious diseases in animals
Externí odkaz:
https://doaj.org/article/f99ea436d3734bc7af27eb2cfa751e8b
Autor:
Jonathan L. Longmire, Andrew W. Bartlow, Jeanne M. Fair, Judith D. Cohn, Joel Berendzen, Benjamin H. McMahon, Marti Jenkins, Lindsey Jacobs, Momchilo Vuyisich, Cheryl D. Gleasner, Nicolas W. Hengartner
Publikováno v:
PLoS ONE
PLoS ONE, Vol 14, Iss 12, p e0225858 (2019)
PLoS ONE, Vol 14, Iss 12, p e0225858 (2019)
Around the world, scavenging birds such as vultures and condors have been experiencing drastic population declines. Scavenging birds have a distinct digestive process to deal with higher amounts of bacteria in their primary diet of carcasses in varyi
Autor:
Lindsey Jacobs, Jeanne M. Fair, Benjamin H. McMahon, Joel Berendzen, Marti Jenkins, Nicolas W. Hengartner, Judith D. Cohn, Cheryl D. Gleasner, Momchilo Vuyisich, Jonathan L. Longmire
Publikováno v:
Biophysical Journal. 112:283a-284a
We present a metagenomic analysis of California condor (Gymnogyps californianus) microbiomes with a goal of developing indicators of condor and ecosystem health. 16S ribosomal DNA (rDNA) and shotgun metagenomic DNA sequences were acquired from fecal
Autor:
Jan Swenson, Benjamin H. McMahon, Izabela Stroe, Paul W. Fenimore, Hans Frauenfelder, Robert D. Young, Joel Berendzen, Helén Jansson, Guo Chen
Publikováno v:
Proceedings of the National Academy of Sciences. 106:5129-5134
Protein functions require conformational motions. We show here that the dominant conformational motions are slaved by the hydration shell and the bulk solvent. The protein contributes the structure necessary for function. We formulate a model that is