Výsledky vyhledávání - "Joël, Kuiper"

Akademický článek

Machine learning to help researchers evaluate biases in clinical trials: a prospective, randomized user study

Autor: Frank Soboczenski, Thomas A. Trikalinos, Joël Kuiper, Randolph G. Bias, Byron C. Wallace, Iain J. Marshall

Publikováno v: BMC Medical Informatics and Decision Making, Vol 19, Iss 1, Pp 1-12 (2019)

Abstract Objective Assessing risks of bias in randomized controlled trials (RCTs) is an important but laborious task when conducting systematic reviews. RobotReviewer (RR), an open-source machine learning (ML) system, semi-automates bias assessments.

Externí odkaz: https://doaj.org/article/2439d8044ca64884b24df73ffaa3c92c

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Machine learning to help researchers evaluate biases in clinical trials: a prospective, randomized user study

Autor: Randolph G. Bias, Joël Kuiper, Frank Soboczenski, Thomas A Trikalinos, Iain J. Marshall, Byron C. Wallace

Publikováno v: BMC Medical Informatics and Decision Making, Vol 19, Iss 1, Pp 1-12 (2019)
BMC Medical Informatics and Decision Making

Objective Assessing risks of bias in randomized controlled trials (RCTs) is an important but laborious task when conducting systematic reviews. RobotReviewer (RR), an open-source machine learning (ML) system, semi-automates bias assessments. We condu

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb7f15bd7a05a7f3e42c497809f68cbc
http://link.springer.com/article/10.1186/s12911-019-0814-z

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Trialstreamer: A living, automatically updated database of clinical trial reports

Autor: James Thomas, Frank Soboczenski, Benjamin E. Nye, Joël Kuiper, Anna H Noel-Storr, Rachel Marshall, Byron C. Wallace, Iain J. Marshall, Rory Maclean, Ani Nenkova

Publikováno v: Journal of the American Medical Informatics Association : JAMIA

Objective Randomized controlled trials (RCTs) are the gold standard method for evaluating whether a treatment works in health care but can be difficult to find and make use of. We describe the development and evaluation of a system to automatically f

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8af971839c10d4b0d85cd6223e898b79
https://pubmed.ncbi.nlm.nih.gov/32940710

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The Hybrid Synthetic Microdata Platform

Autor: Morris A. Swertz, Joël Kuiper, Edwin R. van den Heuvel

Publikováno v: Biopreservation and Biobanking
Biopreservation and biobanking, 13(3), 178-182. MARY ANN LIEBERT, INC

Owners of biobanks are in an unfortunate position: on the one hand, they need to protect the privacy of their participants, whereas on the other, their usefulness relies on the disclosure of the data they hold. Existing methods for Statistical Disclo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2eafed61a6021b0f093213207a129832
https://research.rug.nl/en/publications/c5b0da17-70ee-4e56-acd1-a0376818af69

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Machine learning for identifying Randomized Controlled Trials: An evaluation and practitioner's guide

Autor: Iain J, Marshall, Anna, Noel-Storr, Joël, Kuiper, James, Thomas, Byron C, Wallace

Publikováno v: Research synthesis methods

Machine learning (ML) algorithms have proven highly accurate for identifying Randomized Controlled Trials (RCTs) but are not used much in practice, in part because the best way to make use of the technology in a typical workflow is unclear. In this w

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::d1b831b59022697d4380e90f10cb5755
https://pubmed.ncbi.nlm.nih.gov/29314757

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Automating Biomedical Evidence Synthesis: RobotReviewer

Autor: Joël Kuiper, Edward Banner, Byron C. Wallace, Iain J. Marshall

Publikováno v: ACL (System Demonstrations)
King's College London

We present RobotReviewer, an open-source web-based system that uses machine learning and NLP to semi-automate biomedical evidence synthesis, to aid the practice of Evidence-Based Medicine. RobotReviewer processes full-text journal articles (PDFs) des

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7bde2a464d40235d8164e343639379da
https://doi.org/10.18653/v1/p17-4002

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BiobankConnect: software to rapidly connect data elements for pooled analysis across biobanks using ontological and lexical indexing

Autor: Martijn Dijkstra, Chao Pang, Joël Kuiper, K. Joeri van der Velde, Morris A. Swertz, Dennis Hendriksen, Hans L. Hillege

Publikováno v: Journal of the American Medical Informatics Association : JAMIA
Journal of the American Medical Informatics Association, 22(1), 65-75. B M J PUBLISHING GROUP

Objective Pooling data across biobanks is necessary to increase statistical power, reveal more subtle associations, and synergize the value of data sources. However, searching for desired data elements among the thousands of available elements and ha

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fe10c52b01e3cf1a9bf9a9774e234d1a
https://doi.org/10.1136/amiajnl-2013-002577

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RobotReviewer: evaluation of a system for automatically assessing bias in clinical trials

Autor: Joël Kuiper, Byron C. Wallace, Iain J. Marshall

Publikováno v: Journal of the American Medical Informatics Association, 23(1), 193-201. B M J PUBLISHING GROUP
Journal of the American Medical Informatics Association : JAMIA
Marshall, I, Kuiper, J & Wallace, B C 2016, ' RobotReviewer : Evaluation of a System for Automatically Assessing Bias in Clinical Trials ', Journal of the American Medical Informatics Association : JAMIA, vol. 23, no. 1, pp. 193-201 . https://doi.org/10.1093/jamia/ocv044

Objective To develop and evaluate RobotReviewer, a machine learning (ML) system that automatically assesses bias in clinical trials. From a (PDF-formatted) trial report, the system should determine risks of bias for the domains defined by the Cochran

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8ef363e60041104709cdda2cefef96ac
https://research.rug.nl/en/publications/35c029d9-d2fb-4832-8741-494eb23424f7

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Extracting PICO Sentences from Clinical Trial Reports using Supervised Distant Supervision

Autor: Wallace, Byron C., Joël Kuiper, Aakash Sharma, Mingxi (Brian) Zhu, Iain Marshall

Publikováno v: Wallace, B C, Kuiper, J, Sharma, A, Zhu, M & Marshall, I J 2016, ' Extracting PICO Sentences from Clinical Trial Reports using Supervised Distant Supervision ', JOURNAL OF MACHINE LEARNING RESEARCH, vol. 17, no. 132, pp. 1-25 . < http://jmlr.org/papers/v17/15-404.html >
King's College London

Systematic reviews underpin Evidence Based Medicine (EBM) by addressing precise clinical questions via comprehensive synthesis of all relevant published evidence. Authors of systematic reviews typically define a Population/Problem, Intervention, Comp

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::2291aec889cd9e59c8ad5d33fe814075
https://europepmc.org/articles/PMC5065023/

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PyPedia

Autor: Joël Kuiper, Morris A. Swertz, George Potamias, Alexandros Kanterakis

Publikováno v: Source code for biology and medicine, 10:14. BioMed Central Ltd.
Source Code for Biology and Medicine

Background Today researchers can choose from many bioinformatics protocols for all types of life sciences research, computational environments and coding languages. Although the majority of these are open source, few of them possess all virtues to ma

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a6f90d786cc915cf62a7c84b226fb045
https://doi.org/10.1186/s13029-015-0042-6

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