Zobrazeno 1 - 10
of 40
pro vyhledávání: '"João P. G. L. M. Rodrigues"'
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2021)
Owing to its clinical significance, modulation of functionally relevant amino acids in protein-protein complexes has attracted a great deal of attention. To this end, many approaches have been proposed to predict the partner-selecting amino acid posi
Externí odkaz:
https://doaj.org/article/14503ba127af405bbbdff34aa7359916
Publikováno v:
F1000Research, Vol 7 (2018)
The pdb-tools are a collection of Python scripts for working with molecular structure data in the Protein Data Bank (PDB) format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner. The
Externí odkaz:
https://doaj.org/article/c0deeab074e64b42a60af7f00842dc19
Autor:
Ilya R. Fischhoff, Barbara A. Han, Arvind Varsani, João P. G. L. M. Rodrigues, Adrian A. Castellanos
Publikováno v:
Proc Biol Sci
Summary Back and forth transmission of SARS-CoV-2 between humans and animals has the potential to create wild reservoirs of virus that can endanger both long-term control of COVID-19 in people, and vulnerable animal populations that are particularly
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b7e825f6efa0eb2817c8f80f8e143449
https://doi.org/10.1098/rspb.2021.1651
https://doi.org/10.1098/rspb.2021.1651
Autor:
Mikael Trellet, Alexandre M. J. J. Bonvin, João M.C. Teixeira, João P. G. L. M. Rodrigues, Brian Jiménez-García
The Protein Data Bank (PDB) file format remains a popular format used and supported by many software to represent coordinates of macromolecular structures. It however suffers from drawbacks such as error-prone manual editing. Because of that, various
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a74070e3f94b455d5de788aacd4f33c9
https://doi.org/10.22541/au.159662521.16200914
https://doi.org/10.22541/au.159662521.16200914
Autor:
Elizabeth Seckel, Susana Barrera-Vilarmau, Michael Levitt, Panagiotis L. Kastritis, João P. G. L. M. Rodrigues, João M.C. Teixeira, Marija Sorokina
Publikováno v:
PLoS Computational Biology
Digital.CSIC. Repositorio Institucional del CSIC
instname
PLoS Computational Biology, Vol 16, Iss 12, p e1008449 (2020)
bioRxiv
article-version (status) pre
article-version (number) 1
Digital.CSIC. Repositorio Institucional del CSIC
instname
PLoS Computational Biology, Vol 16, Iss 12, p e1008449 (2020)
bioRxiv
article-version (status) pre
article-version (number) 1
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is responsible for the ongoing global pandemic that has infected more than 31 million people in more than 180 countries worldwide. Like other coronaviruses, SARS-CoV-2 is thought to have be
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::19183ad67e9fe1e2676911da111e17b6
http://hdl.handle.net/10261/213872
http://hdl.handle.net/10261/213872
Autor:
Yi-Wei Chang, Elitza I. Tocheva, Morgan Beeby, João P. G. L. M. Rodrigues, Davi R. Ortega, Michael J. Sweredoski, Grant J. Jensen, Mohammed Kaplan
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Significance In order to understand the evolution of complex biological machines like the bacterial flagellar motor, it is crucial to know what each component does and when it arose. Here, we show that a subcomplex of the motor thought to act as a bu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d22305a08c891c022c31dc0b6bb5791a
https://pubmed.ncbi.nlm.nih.gov/32241888
https://pubmed.ncbi.nlm.nih.gov/32241888
Autor:
Fred Naider, Michael Levitt, João P. G. L. M. Rodrigues, Jacob Anglister, Gautam Srivastava, Meital Abayev, Mariusz Jaremko, Boris Arshava, Łukasz Jaremko
Publikováno v:
The FEBS Journal. 285:1988-2003
The inflammatory chemokine CCL5, which binds the chemokine receptor CCR5 in a two-step mechanism so as to activate signaling pathways in hematopoetic cells, plays an important role in immune surveillance, inflammation, and development as well as in s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e8ddcbcf9287ca942bc20f3495dc402
https://doi.org/10.1111/febs.14460
https://doi.org/10.1111/febs.14460
Supramolekulare Organisation und funktionale Auswirkungen von Ballungen von K+ -Kanälen in Membranen
Autor:
João P. G. L. M. Rodrigues, Markus Weingarth, João Medeiros-Silva, Koen M. Visscher, Mark Daniëls, Deni Mance, Alexandre M. J. J. Bonvin, Marc Baldus
Publikováno v:
Angewandte Chemie. 129:13404-13409
Die Segregation von zellularen Oberflachen in heterogene Regionen wird in Bakterien und Eukaryoten als gelaufiges Motiv betrachtet, und diese Sichtweise wird durch die Beobachtung von Ballungen und funktionalen Kopplungen von Membranproteinen wie Ion
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::05427ac048b44083f923ff5ffc317ede
https://doi.org/10.1002/ange.201705723
https://doi.org/10.1002/ange.201705723
Autor:
Grant J. Jensen, Mohammed Kaplan, Yi-Wei Chang, Morgan Beeby, Elitza I. Tocheva, João P. G. L. M. Rodrigues, Davi R. Ortega, Michael J. Sweredoski
The bacterial flagellar motor is an amazing nanomachine. Understanding how such complex structures arose is crucial to our understanding of cellular evolution. We and others recently reported that in several Gammaproteobacterial species, a relic sub-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a2b0d02e07e7534b02e43642807a6b9d
https://doi.org/10.1101/786715
https://doi.org/10.1101/786715
Autor:
Matthieu, Masureel, Yaozhong, Zou, Louis-Philippe, Picard, Emma, van der Westhuizen, Jacob P, Mahoney, João P G L M, Rodrigues, Thomas J, Mildorf, Ron O, Dror, David E, Shaw, Michel, Bouvier, Els, Pardon, Jan, Steyaert, Roger K, Sunahara, William I, Weis, Cheng, Zhang, Brian K, Kobilka
Publikováno v:
Nature chemical biology
Salmeterol is a partial agonist for the β2 adrenergic receptor (β2AR), and the first long-acting β2AR agonist (LABA) to be widely used clinically for the treatment of asthma and chronic obstructive pulmonary disease. Salmeterol has been controvers
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::55635eff60f3457edd1bb8935cdb0a9e
https://pubmed.ncbi.nlm.nih.gov/30327561
https://pubmed.ncbi.nlm.nih.gov/30327561