Zobrazeno 1 - 10
of 49
pro vyhledávání: '"Jiri Vondrasek"'
Autor:
Clare Garrard, Teresa D’Altri, Xenia Perez-Sitja, Minna Ahokas, Niclas Jareborg, Flavio Licciulli, Ivan Mičetić, Nils-Christian Lübke, Helena Schnitzer, Daniel Wibberg, Yvonne Kallberg, Flora D'Anna, Patricia M. Palagi, Mijke Jetten, Korbinian Bösl, Wei Gu, Munazah Andrabi, Katharina F. Heil, Susanna-Assunta Sansone, Ana M. P. Melo, Jiri Vondrasek, Daniel Faria, Ulrike Wittig, Anastasis Oulas, Jorge Oliveira, Pinar Alper, Robert Andrews, Siiri Fuchs, Celia van Gelder, Thanasis Vergoulis, Brane Leskošek, Krzysztof Poterlowicz, Patrick Ruch, Nazeefa Fatima
Publikováno v:
F1000Research, Vol 13 (2024)
Research data management (RDM) is central to the implementation of the FAIR (Findable Accessible, Interoperable, Reusable) and Open Science principles. Recognising the importance of RDM, ELIXIR Platforms and Nodes have invested in RDM and launched va
Externí odkaz:
https://doaj.org/article/1bbf09f9e16849dea9ed929b92e2f9d4
Autor:
Frantisek Spoutil, Goretti Aranaz-Novaliches, Michaela Prochazkova, Tomas Wald, Vendula Novosadova, Petr Kasparek, Radim Osicka, Janne E. Reseland, Staale P. Lyngstadaas, Hanna Tiainen, Kristyna Bousova, Jiri Vondrasek, Radislav Sedlacek, Jan Prochazka
Publikováno v:
Scientific Reports, Vol 13, Iss 1, Pp 1-14 (2023)
Abstract Highly specialized enamel matrix proteins (EMPs) are predominantly expressed in odontogenic tissues and diverged from common ancestral gene. They are crucial for the maturation of enamel and its extreme complexity in multiple independent lin
Externí odkaz:
https://doaj.org/article/9cee86c6099c4e5593b71dbfde9ce7ab
Autor:
Milos Musil, Andrej Jezik, Marie Jankujova, Jan Stourac, Jakub Galgonek, Saltuk Mustafa Eyrilmez, Jiri Vondrasek, Jiri Damborsky, David Bednar
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 20, Iss , Pp 6512-6518 (2022)
Protein tunnels are essential in transporting small molecules into the active sites of enzymes. Tunnels' geometrical and physico-chemical properties influence the transport process. The tunnels are attractive hot spots for protein engineering and dru
Externí odkaz:
https://doaj.org/article/14aa7edb75b64030812052db2895149c
Autor:
Kristyna Bousova, Monika Zouharova, Petr Herman, Veronika Vetyskova, Katerina Jiraskova, Jiri Vondrasek
Publikováno v:
Heliyon, Vol 7, Iss 12, Pp e08490- (2021)
Transient receptor potential melastatin 7 (TRPM7) represents melastatin TRP channel with two significant functions, cation permeability and kinase activity. TRPM7 is widely expressed among tissues and is therefore involved in a variety of cellular fu
Externí odkaz:
https://doaj.org/article/245cb55ef8244ca0b6df6edb26d2422a
Autor:
Norman E. Davey, M. Madan Babu, Martin Blackledge, Alan Bridge, Salvador Capella-Gutierrez, Zsuzsanna Dosztanyi, Rachel Drysdale, Richard J. Edwards, Arne Elofsson, Isabella C. Felli, Toby J. Gibson, Aleksandras Gutmanas, John M. Hancock, Jen Harrow, Desmond Higgins, Cy M. Jeffries, Philippe Le Mercier, Balint Mészáros, Marco Necci, Cedric Notredame, Sandra Orchard, Christos A. Ouzounis, Rita Pancsa, Elena Papaleo, Roberta Pierattelli, Damiano Piovesan, Vasilis J. Promponas, Patrick Ruch, Gabriella Rustici, Pedro Romero, Sirarat Sarntivijai, Gary Saunders, Benjamin Schuler, Malvika Sharan, Denis C. Shields, Joel L. Sussman, Jonathan A. Tedds, Peter Tompa, Michael Turewicz, Jiri Vondrasek, Wim F. Vranken, Bonnie Ann Wallace, Kanin Wichapong, Silvio C. E. Tosatto
Publikováno v:
F1000Research, Vol 8 (2019)
Intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs) are now recognised as major determinants in cellular regulation. This white paper presents a roadmap for future e-infrastructure developments in the field of IDP res
Externí odkaz:
https://doaj.org/article/394ab68cdf814790908372f98b29dde4
Autor:
Øystein Stakkestad, Catherine Heyward, Ståle Petter Lyngstadaas, Tirill Medin, Jiri Vondrasek, Aina-Mari Lian, Gita Pezeshki, Janne Elin Reseland
Publikováno v:
Heliyon, Vol 4, Iss 12, Pp e01075- (2018)
Objective: Transcriptional regulatory elements in the ameloblastin (AMBN) promoter indicate that adipogenesis may influence its expression. The objective here was to investigate if AMBN is expressed in adipose tissue, and have a role during different
Externí odkaz:
https://doaj.org/article/2e7763968c1a433da29788f920efb9a7
Autor:
Øystein Stakkestad, Ståle P. Lyngstadaas, Bernd Thiede, Jiri Vondrasek, Bjørn S. Skålhegg, Janne E. Reseland
Publikováno v:
Frontiers in Physiology, Vol 8 (2017)
Ameloblastin (AMBN), an important component of the self-assembled enamel extra cellular matrix, contains several in silico predicted phosphorylation sites. However, to what extent these sites actually are phosphorylated and the possible effects of su
Externí odkaz:
https://doaj.org/article/ba0abe0ddb6d4fcaad735832c737888f
Autor:
Juan Antonio Vizcaíno, Mathias Walzer, Rafael C. Jiménez, Wout Bittremieux, David Bouyssié, Christine Carapito, Fernando Corrales, Myriam Ferro, Albert J.R. Heck, Peter Horvatovich, Martin Hubalek, Lydie Lane, Kris Laukens, Fredrik Levander, Frederique Lisacek, Petr Novak, Magnus Palmblad, Damiano Piovesan, Alfred Pühler, Veit Schwämmle, Dirk Valkenborg, Merlijn van Rijswijk, Jiri Vondrasek, Martin Eisenacher, Lennart Martens, Oliver Kohlbacher
Publikováno v:
F1000Research, Vol 6 (2017)
Computational approaches have been major drivers behind the progress of proteomics in recent years. The aim of this white paper is to provide a framework for integrating computational proteomics into ELIXIR in the near future, and thus to broaden the
Externí odkaz:
https://doaj.org/article/320306b83ea146da81c7a3d49d65d155
Autor:
Jiri Vondrasek, Lucie Bednárová, Konstantinos Tripsianes, Ondrej Vanek, Monika Zouharova, Kristyna Bousova, Kateřina Hofbauerová, Olivia Petrvalska, Veronika Vetyskova, Klara Postulkova
Publikováno v:
Protein Sci
Most of the structural proteins known today are composed of domains that carry their own functions while keeping their structural properties. It is supposed that such domains, when taken out of the context of the whole protein, can retain their origi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9e8fbccd10a2d9d22382bd1f4aad90ee
https://doi.org/10.1002/pro.4107
https://doi.org/10.1002/pro.4107
Autor:
Jiří Vymětal, Kateřina Mertová, Kristýna Boušová, Josef Šulc, Konstantinos Tripsianes, Jiri Vondrasek
Publikováno v:
ProteinsREFERENCES. 90(12)
Proteins are naturally formed by domains edging their functional and structural properties. A domain out of the context of an entire protein can retain its structure and to some extent also function on its own. These properties rationalize constructi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a0e45ab042ed904e4e02c9550bb0b1fd
https://pubmed.ncbi.nlm.nih.gov/35833233
https://pubmed.ncbi.nlm.nih.gov/35833233