Zobrazeno 1 - 10 of 77 pro vyhledávání: '"Jichun, Xie"'
1
Akademický článek
Clustering Deviation Index (CDI): a robust and accurate internal measure for evaluating scRNA-seq data clustering
Autor: Jiyuan Fang, Cliburn Chan, Kouros Owzar, Liuyang Wang, Diyuan Qin, Qi-Jing Li, Jichun Xie
Publikováno v: Genome Biology, Vol 23, Iss 1, Pp 1-28 (2022)
Abstract Most single-cell RNA sequencing (scRNA-seq) analyses begin with cell clustering; thus, the clustering accuracy considerably impacts the validity of downstream analyses. In contrast with the abundance of clustering methods, the tools to asses
Externí odkaz: https://doaj.org/article/e890f60a76644652938dd0652f203383
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2
Akademický článek
Single-cell landscape analysis unravels molecular programming of the human B cell compartment in chronic GVHD
Autor: Jonathan C. Poe, Jiyuan Fang, Dadong Zhang, Marissa R. Lee, Rachel A. DiCioccio, Hsuan Su, Xiaodi Qin, Jennifer Y. Zhang, Jonathan Visentin, Sonali J. Bracken, Vincent T. Ho, Kathy S. Wang, Jeremy J. Rose, Steven Z. Pavletic, Frances T. Hakim, Wei Jia, Amy N. Suthers, Itaevia M. Curry-Chisolm, Mitchell E. Horwitz, David A. Rizzieri, William C. McManigle, Nelson J. Chao, Adela R. Cardones, Jichun Xie, Kouros Owzar, Stefanie Sarantopoulos
Publikováno v: JCI Insight, Vol 8, Iss 11 (2023)
Alloreactivity can drive autoimmune syndromes. After allogeneic hematopoietic stem cell transplantation (allo-HCT), chronic graft-versus-host disease (cGVHD), a B cell–associated autoimmune-like syndrome, commonly occurs. Because donor-derived B ce
Externí odkaz: https://doaj.org/article/6512c743367141a7ad578b252db65faa
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4
Akademický článek
Evaluating immune response and metabolic related biomarkers pre-allogenic hematopoietic stem cell transplant in acute myeloid leukemia
Autor: Sharareh Siamakpour-Reihani, Felicia Cao, Jing Lyu, Yi Ren, Andrew B. Nixon, Jichun Xie, Amy T. Bush, Mark D. Starr, James R. Bain, Michael J. Muehlbauer, Olga Ilkayeva, Virginia Byers Kraus, Janet L. Huebner, Nelson J. Chao, Anthony D. Sung
Publikováno v: PLoS ONE, Vol 17, Iss 6 (2022)
Although hematopoietic stem cell transplantation (HCT) is the only curative treatment for acute myeloid leukemia (AML), it is associated with significant treatment related morbidity and mortality. There is great need for predictive biomarkers associa
Externí odkaz: https://doaj.org/article/b4b09d353c214ef2b6362d7af17d6400
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7
SifiNet: A robust and accurate method to identify feature gene sets and annotate cells
Autor: Qi Gao, Jason Ji, Liuyang Wang, Kouros Owzar, Qi-Jing Li, Cliburn Chan, Jichun Xie
Single-cell sequencing has provided a means of quantifying cellular omic phenotypes. Identifying cell-type-specific feature genes is a crucial aspect of understanding cellular heterogeneity. Over the past decade, many methods have been developed to i
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::e3041c3856579ec742ddf7da9a8f27ca
https://doi.org/10.1101/2023.05.24.541352
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