Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Jessica E. Koopman"'
Autor:
Mia Truter, Jessica E. Koopman, Karen Jordaan, Leon Oma Tsamkxao, Don A. Cowan, Simon J. Underdown, Jean-Baptiste Ramond, Riaan F. Rifkin
Publikováno v:
Cell Reports, Vol 43, Iss 2, Pp 113690- (2024)
Summary: We investigate the bacterial and fungal composition and functionality of the Ju|’hoansi intestinal microbiome (IM). The Juǀʼhoansi are a hunter-gatherer community residing in northeastern Namibia. They formerly subsisted by hunting and g
Externí odkaz:
https://doaj.org/article/e3a602968fdc4333830c38ace6e3c3ca
Autor:
Riaan F. Rifkin, Surendra Vikram, Jean-Baptiste Ramond, Alba Rey-Iglesia, Tina B. Brand, Guillaume Porraz, Aurore Val, Grant Hall, Stephan Woodborne, Matthieu Le Bailly, Marnie Potgieter, Simon J. Underdown, Jessica E. Koopman, Don A. Cowan, Yves Van de Peer, Eske Willerslev, Anders J. Hansen
Publikováno v:
Microbiome, Vol 8, Iss 1, Pp 1-23 (2020)
Abstract Background The archaeological incidence of ancient human faecal material provides a rare opportunity to explore the taxonomic composition and metabolic capacity of the ancestral human intestinal microbiome (IM). Here, we report the results o
Externí odkaz:
https://doaj.org/article/430d2c28a3c445529c3bc4454c28e132
Autor:
Jessica E Koopman, Nicoline C W van der Kaaij, Mark J Buijs, Yassaman Elyassi, Monique H van der Veen, Wim Crielaard, Jacob M Ten Cate, Egija Zaura
Publikováno v:
PLoS ONE, Vol 10, Iss 9, p e0137318 (2015)
While the aesthetic effect of orthodontic treatment is clear, the knowledge on how it influences the oral microbiota and the consequential effects on oral health are limited. In this randomized controlled clinical trial we investigated the changes in
Externí odkaz:
https://doaj.org/article/4a94fb1103e64567961edf13ce73616e
Autor:
Anders J. Hansen, Aurore Val, Marnie Potgieter, Simon J. Underdown, Stephan Woodborne, Jessica E. Koopman, Guillaume Porraz, Grant Hall, Eske Willerslev, Tina B. Brand, Riaan F. Rifkin, Yves Van de Peer, Surendra Vikram, Don A. Cowan, Matthieu Le Bailly, Jean-Baptiste Ramond, Alba Rey-Iglesia
Publikováno v:
Microbiome
Microbiome, 2020, 8, ⟨10.1186/s40168-020-00832-x⟩
Microbiome, Vol 8, Iss 1, Pp 1-23 (2020)
Microbiome, BioMed Central, 2020, 8 (1), ⟨10.1186/s40168-020-00832-x⟩
Microbiome, BioMed Central, 2020, 8, ⟨10.1186/s40168-020-00832-x⟩
MICROBIOME
Rifkin, R F, Vikram, S, Ramond, J B, Rey-Iglesia, A, Brand, T B, Porraz, G, Val, A, Hall, G, Woodborne, S, Le Bailly, M, Potgieter, M, Underdown, S J, Koopman, J E, Cowan, D A, Van De Peer, Y, Willerslev, E & Hansen, A J 2020, ' Multi-proxy analyses of a mid-15th century Middle Iron Age Bantu-speaker palaeo-faecal specimen elucidates the configuration of the 'ancestral' sub-Saharan African intestinal microbiome ', Microbiome, vol. 8, no. 1, 62 . https://doi.org/10.1186/s40168-020-00832-x
Microbiome, 2020, 8, ⟨10.1186/s40168-020-00832-x⟩
Microbiome, Vol 8, Iss 1, Pp 1-23 (2020)
Microbiome, BioMed Central, 2020, 8 (1), ⟨10.1186/s40168-020-00832-x⟩
Microbiome, BioMed Central, 2020, 8, ⟨10.1186/s40168-020-00832-x⟩
MICROBIOME
Rifkin, R F, Vikram, S, Ramond, J B, Rey-Iglesia, A, Brand, T B, Porraz, G, Val, A, Hall, G, Woodborne, S, Le Bailly, M, Potgieter, M, Underdown, S J, Koopman, J E, Cowan, D A, Van De Peer, Y, Willerslev, E & Hansen, A J 2020, ' Multi-proxy analyses of a mid-15th century Middle Iron Age Bantu-speaker palaeo-faecal specimen elucidates the configuration of the 'ancestral' sub-Saharan African intestinal microbiome ', Microbiome, vol. 8, no. 1, 62 . https://doi.org/10.1186/s40168-020-00832-x
Funder: Ministère des Affaires Etrangères; doi: http://dx.doi.org/10.13039/501100003763
Background: The archaeological incidence of ancient human faecal material provides a rare opportunity to explore the taxonomic composition and metabolic ca
Background: The archaeological incidence of ancient human faecal material provides a rare opportunity to explore the taxonomic composition and metabolic ca
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bba6c427ae0909dd2a9b9e1f4e989411
Autor:
Jessica E. Koopman, Bart J. F. Keijser, E. Zaura, Wim Crielaard, Bernd W. Brandt, Mark J. Buijs
Publikováno v:
Microbial Ecology
Koopman, J E, Buijs, M J, Brandt, B W, Keijser, B J F, Crielaard, W & Zaura, E 2016, ' Nitrate and the origin of saliva influence composition and short chain fatty acid production of oral microcosms ', Microbial Ecology, vol. 72, no. 2, pp. 479-492 . https://doi.org/10.1007/s00248-016-0775-z
Microbial Ecology, 72(2), 479-492. Springer New York
Koopman, J E, Buijs, M J, Brandt, B W, Keijser, B J F, Crielaard, W & Zaura, E 2016, ' Nitrate and the origin of saliva influence composition and short chain fatty acid production of oral microcosms ', Microbial Ecology, vol. 72, no. 2, pp. 479-492 . https://doi.org/10.1007/s00248-016-0775-z
Microbial Ecology, 72(2), 479-492. Springer New York
Nitrate is emerging as a possible health benefactor. Especially the microbial conversion of nitrate to nitrite in the oral cavity and the subsequent conversion to nitric oxide in the stomach are of interest in this regard. Yet, how nitrate influences
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8865ce967ea2425887cc259b40df1a94
https://hdl.handle.net/11245.1/680a37ad-dcaa-4d0b-9985-cad70f99681a
https://hdl.handle.net/11245.1/680a37ad-dcaa-4d0b-9985-cad70f99681a
Autor:
Jacob M. ten Cate, Wim Crielaard, Bernd W. Brandt, Mark J. Buijs, Michel A. Hoogenkamp, Egija Zaura, Jessica E. Koopman, Bart J. F. Keijser
Publikováno v:
Archives of Oral Biology, 73, 79-87
Koopman, J E, Hoogenkamp, M A, Buijs, M J, Brandt, B W, Keijser, B J F, Crielaard, W, ten Cate, J M & Zaura, E 2017, ' Changes in the oral ecosystem induced by the use of 8% arginine toothpaste ', Archives of Oral Biology, vol. 73, pp. 79-87 . https://doi.org/10.1016/j.archoralbio.2016.09.008
Archives of Oral Biology, 73, 79-87. Elsevier
Archives of Oral Biology, 73, 79-87. Elsevier Limited
Koopman, J E, Hoogenkamp, M A, Buijs, M J, Brandt, B W, Keijser, B J F, Crielaard, W, ten Cate, J M & Zaura, E 2017, ' Changes in the oral ecosystem induced by the use of 8% arginine toothpaste ', Archives of Oral Biology, vol. 73, pp. 79-87 . https://doi.org/10.1016/j.archoralbio.2016.09.008
Archives of Oral Biology, 73, 79-87. Elsevier
Archives of Oral Biology, 73, 79-87. Elsevier Limited
Objective: Bacterial metabolism of arginine in the oral cavity has a pH-raising and thus, potential anti-caries effect. However, the influence of arginine on the oral microbial ecosystem remains largely unresolved. Design: In this pilot study, nine h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::956ee51c9c916eb82833c767bf6ec52b
http://resolver.tudelft.nl/uuid:badacf4c-7a48-41e5-9258-4054b0784089
http://resolver.tudelft.nl/uuid:badacf4c-7a48-41e5-9258-4054b0784089
Autor:
Wilfred F. M. Röling, Wim Crielaard, Mark J. Buijs, Jacob M. ten Cate, Jessica E. Koopman, Bart J. F. Keijser, Egija Zaura, Christopher H. Sissons
Publikováno v:
Microbial Ecology, 69(2), 422-433. Springer New York
Microbial Ecology, 69(2):2, 422-433. Springer New York
Koopman, J E, Roling, W F M, Buijs, M J, Sissons, C, ten Cate, J M, Keijser, B J F, Crielaard, W & Zaura, E 2015, ' Stability and resilience of oral microcosms toward acidification and Candida outgrowth by arginine supplementation ', Microbial Ecology, vol. 69, no. 2, 2, pp. 422-433 . https://doi.org/10.1007/s00248-014-0535-x
Koopman, J E, Röling, W F M, Buijs, M J, Sissons, C H, ten Cate, J M, Keijser, B J F, Crielaard, W & Zaura, E 2014, ' Stability and resilience of oral microcosms toward acidification and Candida outgrowth by arginine supplementation ', Microbial Ecology, vol. 69, no. 2, pp. 422-433 . https://doi.org/10.1007/s00248-014-0535-x
Microbial Ecology, 69(2):2, 422-433. Springer New York
Koopman, J E, Roling, W F M, Buijs, M J, Sissons, C, ten Cate, J M, Keijser, B J F, Crielaard, W & Zaura, E 2015, ' Stability and resilience of oral microcosms toward acidification and Candida outgrowth by arginine supplementation ', Microbial Ecology, vol. 69, no. 2, 2, pp. 422-433 . https://doi.org/10.1007/s00248-014-0535-x
Koopman, J E, Röling, W F M, Buijs, M J, Sissons, C H, ten Cate, J M, Keijser, B J F, Crielaard, W & Zaura, E 2014, ' Stability and resilience of oral microcosms toward acidification and Candida outgrowth by arginine supplementation ', Microbial Ecology, vol. 69, no. 2, pp. 422-433 . https://doi.org/10.1007/s00248-014-0535-x
Dysbiosis induced by low pH in the oral ecosystem can lead to caries, a prevalent bacterial disease in humans. The amino acid arginine is one of the pH-elevating agents in the oral cavity. To obtain insights into the effect of arginine on oral microb
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c74ee5650911456d6b6db96dac2f01a
https://hdl.handle.net/11245/1.444561
https://hdl.handle.net/11245/1.444561
Autor:
E. Zaura, J.M. ten Cate, R.A.M. Exterkate, Wim Crielaard, Jessica E. Koopman, Bernd W. Brandt, Mark J. Buijs
Publikováno v:
Clinical Oral Investigations, 19(4), 813-822. Springer Verlag
Exterkate, R A M, Zaura, E, Brandt, B W, Buijs, M J, Koopman, J E, Crielaard, W & ten Cate, J M 2015, ' The effect of propidium monoazide treatment on the measured bacterial composition of clinical samples after the use of a mouthwash ', Clinical Oral Investigations, vol. 19, no. 4, pp. 813-822 . https://doi.org/10.1007/s00784-014-1297-z
Exterkate, R A M, Zaura, E, Brandt, B W, Buijs, M J, Koopman, J E, Crielaard, W & ten Cate, J M 2015, ' The effect of propidium monoazide treatment on the measured bacterial composition of clinical samples after the use of a mouthwash ', Clinical Oral Investigations, vol. 19, no. 4, pp. 813-822 . https://doi.org/10.1007/s00784-014-1297-z
ObjectivesThe use of an anti-microbial mouthwash results not only in a reduction of the number of viable cells in dental plaque but potentially also in a shift in the oral microbiome. DNA-based techniques may be appropriate to monitor these shifts, b
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::613ac84c7a12e77db25d6b3c371ee393
https://research.vu.nl/en/publications/e8cdc97b-99b4-421b-bc78-bcc4df6a2dd4
https://research.vu.nl/en/publications/e8cdc97b-99b4-421b-bc78-bcc4df6a2dd4
Autor:
Yassaman Elyassi, Nicoline C. W. van der Kaaij, Monique H. van der Veen, Jessica E. Koopman, Jacob M. ten Cate, Mark J. Buijs, Wim Crielaard, Egija Zaura
Publikováno v:
PLoS ONE, 10(9):e0137318. Public Library of Science
PLoS ONE
Koopman, J E, van der Kaaij, N C W, Buijs, M J, Elyassi, Y, van der Veen, M H, Crielaard, W, ten Cate, J M & Zaura, E 2015, ' The effect of fixed orthodontic appliances and fluoride mouthwash on the oral microbiome of adolescents: a randomized controlled clinical trial ', PLoS ONE, vol. 10, no. 9, e0137318 . https://doi.org/10.1371/journal.pone.0137318
PLoS ONE, Vol 10, Iss 9, p e0137318 (2015)
PLoS ONE
Koopman, J E, van der Kaaij, N C W, Buijs, M J, Elyassi, Y, van der Veen, M H, Crielaard, W, ten Cate, J M & Zaura, E 2015, ' The effect of fixed orthodontic appliances and fluoride mouthwash on the oral microbiome of adolescents: a randomized controlled clinical trial ', PLoS ONE, vol. 10, no. 9, e0137318 . https://doi.org/10.1371/journal.pone.0137318
PLoS ONE, Vol 10, Iss 9, p e0137318 (2015)
While the aesthetic effect of orthodontic treatment is clear, the knowledge on how it influences the oral microbiota and the consequential effects on oral health are limited. In this randomized controlled clinical trial we investigated the changes in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bd11b2a8a0a93debed26fe6ee7fdfeac
https://doi.org/10.1371/journal.pone.0137318
https://doi.org/10.1371/journal.pone.0137318
This chapter provides an overview on the diversity and composition of the oral microbiome of healthy individuals, including relevant species of bacteria, Archaea, fungi and viruses.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dbee102ef03913b7024286330828d8f3
https://doi.org/10.1079/9781780640495.0020
https://doi.org/10.1079/9781780640495.0020