Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Jesse, McNichol"'
Autor:
Felix Milke, Selene Sanchez-Garcia, Leon Dlugosch, Jesse McNichol, Jed Fuhrman, Meinhard Simon, Irene Wagner-Döbler
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
Basin-scale biogeographic observations of marine pelagic pro- and eukaryotic communities are necessary to understand forces driving community composition and for providing a baseline to monitor global change. Deep sequencing of rRNA genes provides co
Externí odkaz:
https://doaj.org/article/b3a074ea9dd541e298c714ef5aa2270f
Publikováno v:
mSystems, Vol 6, Iss 3 (2021)
PCR amplification and sequencing of marker genes are a low-cost technique for monitoring prokaryotic and eukaryotic microbial communities across space and time but will work optimally only if environmental organisms match PCR primer sequences exactly
Externí odkaz:
https://doaj.org/article/545ab02f97a3485c8626124d01536202
Autor:
Jessica M. Labonté, Maria Pachiadaki, Elizabeth Fergusson, Jesse McNichol, Ashley Grosche, Lara K. Gulmann, Costantino Vetriani, Stefan M. Sievert, Ramunas Stepanauskas
Publikováno v:
Frontiers in Microbiology, Vol 10 (2019)
Phage–host interactions likely play a major role in the composition and functioning of many microbiomes, yet remain poorly understood. Here, we employed single cell genomics to investigate phage–host interactions in a diffuse-flow, low-temperatur
Externí odkaz:
https://doaj.org/article/464585b265f24e378ccff3abe061e0fb
Publikováno v:
Environmental Microbiology. 23:3240-3250
Universal primers for SSU rRNA genes allow profiling of natural communities by simultaneously amplifying templates from Bacteria, Archaea, and Eukaryota in a single PCR reaction. Despite the potential to show relative abundance for all rRNA genes, un
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::571671413301ebdca8ce374a4ad7d871
https://doi.org/10.1111/1462-2920.15553
https://doi.org/10.1111/1462-2920.15553
Autor:
Stefan M. Sievert, Marc Mußmann, Stefan Dyksma, Sean P. Sylva, Jesse McNichol, Jeffrey S. Seewald
Publikováno v:
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
Molecular surveys of low temperature deep-sea hydrothermal vent fluids have shown that Campylobacteria (previously Epsilonproteobacteria) often dominate the microbial community and that three genera, Arcobacter, Sulfurimonas, and Sulfurovum, frequent
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ff8ef45f4146f2f2b4f7560a8c78b624
https://hdl.handle.net/21.11116/0000-000A-7140-E21.11116/0000-000A-713E-2
https://hdl.handle.net/21.11116/0000-000A-7140-E21.11116/0000-000A-713E-2
Publikováno v:
Environmental microbiologyReferences. 24(1)
Marine intertidal sediments fluctuate in redox conditions and nutrient availability, and they are also known as an important sink of nitrogen mainly through denitrification, yet how denitrifying bacteria adapt to this dynamic habitat remains largely
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fea4a8ab1ba6394f5b556aba6a1b84f4
https://pubmed.ncbi.nlm.nih.gov/34964547
https://pubmed.ncbi.nlm.nih.gov/34964547
Autor:
Jesse, McNichol, Stefan, Dyksma, Marc, Mußmann, Jeffrey S, Seewald, Sean P, Sylva, Stefan M, Sievert
Publikováno v:
Appl Environ Microbiol
Molecular surveys of low temperature deep-sea hydrothermal vent fluids have shown that Campylobacteria (previously Epsilonproteobacteria) often dominate the microbial community and that three genera, Arcobacter, Sulfurimonas, and Sulfurovum, frequent
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::d2033540749ee21ad205fe22822884f4
https://pubmed.ncbi.nlm.nih.gov/34788061
https://pubmed.ncbi.nlm.nih.gov/34788061
Publikováno v:
mSystems
mSystems, Vol 6, Iss 3 (2021)
mSystems, Vol 6, Iss 3 (2021)
Small subunit rRNA (SSU rRNA) amplicon sequencing can quantitatively and comprehensively profile natural microbiomes, representing a critically important tool for studying diverse global ecosystems. However, results will only be accurate if PCR prime
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::95c7ec02c5a9445cb5b073b7877e1ef2
https://doi.org/10.1128/msystems.00565-21
https://doi.org/10.1128/msystems.00565-21
Autor:
Stefan Dyksma, Marc Mussmann, Jeffrey S. Seewald, Stefan M. Sievert, Sean P. Sylva, Jesse McNichol
Molecular surveys of low temperature deep-sea hydrothermal vent fluids have shown that Campylobacteria (prev. Epsilonproteobacteria) often dominate the microbial community and that three subgroups - Arcobacter, Sulfurimonas and Sulfurovum - frequentl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0ad88a02cd74c9b54ee21c8aec3355cd
https://doi.org/10.1101/2020.11.29.402834
https://doi.org/10.1101/2020.11.29.402834
Small subunit ribosomal RNA (SSU rRNA) amplicon sequencing can quantitatively and comprehensively profile natural microbiomes, representing a critically important tool for studying diverse global ecosystems. However, results will only be accurate if
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d03c684dfdbed3f47d9b0608a2b9665b
https://doi.org/10.1101/2020.11.09.375543
https://doi.org/10.1101/2020.11.09.375543