Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA

Autor: Otso Ovaskainen, Nerea Abrego, Brendan Furneaux, Bess Hardwick, Panu Somervuo, Isabella Palorinne, Nigel R. Andrew, Ulyana V. Babiy, Tan Bao, Gisela Bazzano, Svetlana N. Bondarchuk, Timothy C. Bonebrake, Georgina L. Brennan, Syndonia Bret-Harte, Claus Bässler, Luciano Cagnolo, Erin K. Cameron, Elodie Chapurlat, Simon Creer, Luigi P. D’Acqui, Natasha de Vere, Marie-Laure Desprez-Loustau, Michel A. K. Dongmo, Ida B. Dyrholm Jacobsen, Brian L. Fisher, Miguel Flores de Jesus, Gregory S. Gilbert, Gareth W. Griffith, Anna A. Gritsuk, Andrin Gross, Håkan Grudd, Panu Halme, Rachid Hanna, Jannik Hansen, Lars Holst Hansen, Apollon D. M. T. Hegbe, Sarah Hill, Ian D. Hogg, Jenni Hultman, Kevin D. Hyde, Nicole A. Hynson, Natalia Ivanova, Petteri Karisto, Deirdre Kerdraon, Anastasia Knorre, Irmgard Krisai-Greilhuber, Juri Kurhinen, Masha Kuzmina, Nicolas Lecomte, Erin Lecomte, Viviana Loaiza, Erik Lundin, Alexander Meire, Armin Mešić, Otto Miettinen, Norman Monkhause, Peter Mortimer, Jörg Müller, R. Henrik Nilsson, Puani Yannick C. Nonti, Jenni Nordén, Björn Nordén, Claudia Paz, Petri Pellikka, Danilo Pereira, Geoff Petch, Juha-Matti Pitkänen, Flavius Popa, Caitlin Potter, Jenna Purhonen, Sanna Pätsi, Abdullah Rafiq, Dimby Raharinjanahary, Niklas Rakos, Achala R. Rathnayaka, Katrine Raundrup, Yury A. Rebriev, Jouko Rikkinen, Hanna M. K. Rogers, Andrey Rogovsky, Yuri Rozhkov, Kadri Runnel, Annika Saarto, Anton Savchenko, Markus Schlegel, Niels Martin Schmidt, Sebastian Seibold, Carsten Skjøth, Elisa Stengel, Svetlana V. Sutyrina, Ilkka Syvänperä, Leho Tedersoo, Jebidiah Timm, Laura Tipton, Hirokazu Toju, Maria Uscka-Perzanowska, Michelle van der Bank, F. Herman van der Bank, Bryan Vandenbrink, Stefano Ventura, Solvi R. Vignisson, Xiaoyang Wang, Wolfgang W. Weisser, Subodini N. Wijesinghe, S. Joseph Wright, Chunyan Yang, Nourou S. Yorou, Amanda Young, Douglas W. Yu, Evgeny V. Zakharov, Paul D. N. Hebert, Tomas Roslin

Publikováno v: Scientific Data, Vol 11, Iss 1, Pp 1-17 (2024)

Abstract Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested

Externí odkaz: https://doaj.org/article/a665cd3f632448dbad13496c3a4720f6

In-depth characterization of denitrifier communities across different soil ecosystems in the tundra

Autor: Igor S. Pessi, Sirja Viitamäki, Anna-Maria Virkkala, Eeva Eronen-Rasimus, Tom O. Delmont, Maija E. Marushchak, Miska Luoto, Jenni Hultman

Publikováno v: Environmental Microbiome, Vol 17, Iss 1, Pp 1-17 (2022)

Abstract Background In contrast to earlier assumptions, there is now mounting evidence for the role of tundra soils as important sources of the greenhouse gas nitrous oxide (N2O). However, the microorganisms involved in the cycling of N2O in this sys

Externí odkaz: https://doaj.org/article/74942e8dca5a4cadb2da2c467ea622ae

Maternal gut and breast milk microbiota affect infant gut antibiotic resistome and mobile genetic elements

Autor: Katariina Pärnänen, Antti Karkman, Jenni Hultman, Christina Lyra, Johan Bengtsson-Palme, D. G. Joakim Larsson, Samuli Rautava, Erika Isolauri, Seppo Salminen, Himanshu Kumar, Reetta Satokari, Marko Virta

Publikováno v: Nature Communications, Vol 9, Iss 1, Pp 1-11 (2018)

The infant gut microbiota has a high abundance of antibiotic resistance genes (ARGs) even in the absence of antibiotic exposure. Here, Pärnänen et al. analyse breast milk as well as infant and maternal gut microbiomes, and show that some of the inf

Externí odkaz: https://doaj.org/article/46dc8bf8babf4feab2f34a35fb395371

Detection of human papillomaviruses by polymerase chain reaction and ligation reaction on universal microarray.

Autor: Jarmo Ritari, Jenni Hultman, Rita Fingerroos, Jussi Tarkkanen, Janne Pullat, Lars Paulin, Niina Kivi, Petri Auvinen, Eeva Auvinen

Publikováno v: PLoS ONE, Vol 7, Iss 3, p e34211 (2012)

Sensitive and specific detection of human papillomaviruses (HPV) in cervical samples is a useful tool for the early diagnosis of epithelial neoplasia and anogenital lesions. Recent studies support the feasibility of HPV DNA testing instead of cytolog

Externí odkaz: https://doaj.org/article/46043c7541fb4fedac09a36c7f43967a

High-resolution spatial patterns and drivers of terrestrial ecosystem carbon dioxide, methane, and nitrous oxide fluxes in the tundra

Autor: Anna-Maria Virkkala, Pekka Niittynen, Julia Kemppinen, Maija E. Marushchak, Carolina Voigt, Geert Hensgens, Johanna Kerttula, Konsta Happonen, Vilna Tyystjärvi, Christina Biasi, Jenni Hultman, Janne Rinne, Miska Luoto

Arctic terrestrial greenhouse gas (GHG) fluxes of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) play an important role in the global GHG budget. However, these GHG fluxes are rarely studied simultaneously, and our understanding of the c

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b32618623167abf2dd778c2dd97c501f
https://doi.org/10.5194/bg-2023-61