Zobrazeno 1 - 10
of 43
pro vyhledávání: '"Jeffrey C, Berry"'
Autor:
Kira M. Veley, Kiona Elliott, Greg Jensen, Zhenhui Zhong, Suhua Feng, Marisa Yoder, Kerrigan B. Gilbert, Jeffrey C. Berry, Zuh-Jyh Daniel Lin, Basudev Ghoshal, Javier Gallego-Bartolomé, Joanna Norton, Sharon Motomura-Wages, James C. Carrington, Steven E. Jacobsen, Rebecca S. Bart
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-9 (2023)
Activating the expression of host susceptibility (S) genes is one of the strategies plant pathogens employed to promote infection of their host. Here, the authors show that targeted methylation at the TAL20 effector binding element of the cassava SWE
Externí odkaz:
https://doaj.org/article/e7d105312d684276a6638467e05b4c57
Publikováno v:
Plant Methods, Vol 18, Iss 1, Pp 1-12 (2022)
Abstract Background Methods to accurately quantify disease severity are fundamental to plant pathogen interaction studies. Commonly used methods include visual scoring of disease symptoms, tracking pathogen growth in planta over time, and various ass
Externí odkaz:
https://doaj.org/article/faf9351a88894752b8d415e7bf31e1ca
Autor:
Ningning Zhang, Erin M. Mattoon, Will McHargue, Benedikt Venn, David Zimmer, Kresti Pecani, Jooyeon Jeong, Cheyenne M. Anderson, Chen Chen, Jeffrey C. Berry, Ming Xia, Shin-Cheng Tzeng, Eric Becker, Leila Pazouki, Bradley Evans, Fred Cross, Jianlin Cheng, Kirk J. Czymmek, Michael Schroda, Timo Mühlhaus, Ru Zhang
Publikováno v:
Communications Biology, Vol 5, Iss 1, Pp 1-24 (2022)
A systems-wide analysis of the single-cell green alga Chlamydomonas reinhardti reveals shared and unique responses to moderate and acute high temperatures using multiple-level investigation of transcriptomics, proteomics, cell physiology, photosynthe
Externí odkaz:
https://doaj.org/article/e6b649357a044f36996e083c2c4295a3
Autor:
Jeffrey C Berry, Mingsheng Qi, Balasaheb V Sonawane, Amy Sheflin, Asaph Cousins, Jessica Prenni, Daniel P Schachtman, Peng Liu, Rebecca S Bart
Publikováno v:
eLife, Vol 11 (2022)
Environmental variability poses a major challenge to any field study. Researchers attempt to mitigate this challenge through replication. Thus, the ability to detect experimental signals is determined by the degree of replication and the amount of en
Externí odkaz:
https://doaj.org/article/94caaf32400148299b662b392dcd3dc8
Autor:
Jose C. Tovar, Jeffrey C. Berry, Carlos Quillatupa, S. Elizabeth Castillo, Lucia Acosta‐Gamboa, Noah Fahlgren, Malia A. Gehan
Publikováno v:
Plant Direct, Vol 6, Iss 2, Pp n/a-n/a (2022)
Abstract Quinoa is a popular seed crop, often consumed for its high nutritional quality. We studied how heat stress in the roots or the shoots of quinoa plants affected the concentrations of 20 elements (aluminum, arsenic, boron, calcium, cadmium, co
Externí odkaz:
https://doaj.org/article/4c6f0c6ae85840aab25df0eb388b34da
Autor:
Qi Wang, Nadia Shakoor, Adam Boyher, Kira M Veley, Jeffrey C Berry, Todd C Mockler, Rebecca S Bart
Publikováno v:
PLoS Pathogens, Vol 17, Iss 1, p e1009175 (2021)
The zig-zag model of host-pathogen interaction describes the relative strength of defense response across a spectrum of pathogen-induced plant phenotypes. A stronger defense response results in increased resistance. Here, we investigate the strength
Externí odkaz:
https://doaj.org/article/0f750f62d9f1471ab70340ab26ae346e
Autor:
Mingsheng Qi, Jeffrey C. Berry, Kira W. Veley, Lily O’Connor, Omri M. Finkel, Isai Salas-González, Molly Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina del Rio, Cody Creech, Peng Liu, Susannah G. Tringe, Jeffery L. Dangl, Daniel P. Schachtman, Rebecca S. Bart
Publikováno v:
The ISME journal, vol 16, iss 8
Drought is a major abiotic stress limiting agricultural productivity. Previous field-level experiments have demonstrated that drought decreases microbiome diversity in the root and rhizosphere. How these changes ultimately affect plant health remains
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b5d64d3949f72150ecf776192c1d8e0d
https://doi.org/10.1038/s41396-022-01245-4
https://doi.org/10.1038/s41396-022-01245-4
Publikováno v:
PeerJ, Vol 6, p e5727 (2018)
High-throughput phenotyping has emerged as a powerful method for studying plant biology. Large image-based datasets are generated and analyzed with automated image analysis pipelines. A major challenge associated with these analyses is variation in i
Externí odkaz:
https://doaj.org/article/a9b2637bf03545628fba795675c8a580
Autor:
Noah Fahlgren, Rebecca Bart, Shujun Ou, Seth Polydore, Adam Boyher, Mark C. Wilson, Todd P. Michael, Jeffrey C. Berry, Ben N. Mansfeld
Publikováno v:
The Plant Journal. 108:1830-1848
Cassava (Manihot esculenta Crantz, 2n=36) is a global food security crop. Cassava has a highly heterozygous genome, high genetic load, and genotype-dependent asynchronous flowering. It is typically propagated by stem cuttings and any genetic variatio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::961ba4aa26dfab96f4a2af9a08224766
https://doi.org/10.1111/tpj.15543
https://doi.org/10.1111/tpj.15543
Autor:
Malia A. Gehan, Noah Fahlgren, Arash Abbasi, Jeffrey C. Berry, Steven T. Callen, Leonardo Chavez, Andrew N. Doust, Max J. Feldman, Kerrigan B. Gilbert, John G. Hodge, J. Steen Hoyer, Andy Lin, Suxing Liu, César Lizárraga, Argelia Lorence, Michael Miller, Eric Platon, Monica Tessman, Tony Sax
Publikováno v:
PeerJ, Vol 5, p e4088 (2017)
Systems for collecting image data in conjunction with computer vision techniques are a powerful tool for increasing the temporal resolution at which plant phenotypes can be measured non-destructively. Computational tools that are flexible and extenda
Externí odkaz:
https://doaj.org/article/4245848a443e445287f381f536725c33