Zobrazeno 1 - 10
of 44
pro vyhledávání: '"Jean M. Macklaim"'
Autor:
Asako Tan, Senthil Murugapiran, Alaya Mikalauskas, Jeff Koble, Drew Kennedy, Fred Hyde, Victor Ruotti, Emily Law, Jordan Jensen, Gary P. Schroth, Jean M. Macklaim, Scott Kuersten, Brice LeFrançois, Daryl M. Gohl
Publikováno v:
BMC Microbiology, Vol 23, Iss 1, Pp 1-17 (2023)
Abstract The microbiota that colonize the human gut and other tissues are dynamic, varying both in composition and functional state between individuals and over time. Gene expression measurements can provide insights into microbiome composition and f
Externí odkaz:
https://doaj.org/article/4eb70698f25f4d8a8f6a55e39aaa7355
Autor:
Tasha M. Santiago-Rodriguez, Brice Le François, Jean M. Macklaim, Evgueni Doukhanine, Emily B. Hollister
Publikováno v:
Microorganisms, Vol 11, Iss 5, p 1222 (2023)
Skin acts as a barrier that promotes the colonization of bacteria, fungi, archaea, and viruses whose membership and function may differ depending on the various specialized niches or micro-environments of the skin. The group of microorganisms inhabit
Externí odkaz:
https://doaj.org/article/eb89edfd7eb847e5aabeb8af9817cf22
Autor:
Kyle W. MacDonald, Ryan M. Chanyi, Jean M. Macklaim, Peter A. Cadieux, Gregor Reid, Jeremy P. Burton
Publikováno v:
BMC Oral Health, Vol 21, Iss 1, Pp 1-16 (2021)
Abstract Background Periodontal disease represents a major health concern. The administration of beneficial microbes has been increasing in popularity over efforts to manipulate the microbes using antimicrobial agents. This study determined the abili
Externí odkaz:
https://doaj.org/article/3d31e125f2b245a39f87b9337e908a89
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-5 (2019)
Abstract Background Differential abundance analysis is widely used with high-throughput sequencing data to compare gene abundance or expression between groups of samples. Many software packages exist for this purpose, but each uses a unique set of st
Externí odkaz:
https://doaj.org/article/da59f7e49b8f4f67a92dbab29eddc18f
Autor:
Mariya I. Petrova, Jean M. Macklaim, Sander Wuyts, Tine Verhoeven, Jos Vanderleyden, Gregory B. Gloor, Sarah Lebeer, Gregor Reid
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
Lactobacillus represents a versatile bacterial genus, which can adapt to a wide variety of ecological niches, including human body sites such as the intestinal and urogenital tract. In this study, the complete genome sequence of the vaginal probiotic
Externí odkaz:
https://doaj.org/article/64194e4035574b32bf1424c1cdf4921e
Publikováno v:
Austrian Journal of Statistics, Vol 45, Iss 4 (2016)
High throughput sequencing generates sparse compositional data, yet these datasets are rarely analyzed using a compositional approach. In addition, the variation inherent in these datasets is rarely acknowledged, but ignoring it can result in many fa
Externí odkaz:
https://doaj.org/article/5e98df9e430d4f488fb581543e918e2d
Autor:
Lee W. Goneau, Thomas J. Hannan, Roderick A. MacPhee, Drew J. Schwartz, Jean M. Macklaim, Gregory B. Gloor, Hassan Razvi, Gregor Reid, Scott J. Hultgren, Jeremy P. Burton
Publikováno v:
mBio, Vol 6, Iss 2 (2015)
ABSTRACT The capacity of subinhibitory levels of antibiotics to modulate bacterial virulence in vitro has recently been brought to light, raising concerns over the appropriateness of low-dose therapies, including antibiotic prophylaxis for recurrent
Externí odkaz:
https://doaj.org/article/71cdc9b505b747b28355f83dc166f593
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-5 (2019)
BMC Bioinformatics
BMC Bioinformatics
Background Differential abundance analysis is widely used with high-throughput sequencing data to compare gene abundance or expression between groups of samples. Many software packages exist for this purpose, but each uses a unique set of statistical
Autor:
Ryan M. Chanyi, Kyle MacDonald, Peter A. Cadieux, Jeremy P. Burton, Gregor Reid, Jean M. Macklaim
Publikováno v:
BMC Oral Health
BMC Oral Health, Vol 21, Iss 1, Pp 1-16 (2021)
BMC Oral Health, Vol 21, Iss 1, Pp 1-16 (2021)
Background Periodontal disease represents a major health concern. The administration of beneficial microbes has been increasing in popularity over efforts to manipulate the microbes using antimicrobial agents. This study determined the ability of Str
Publikováno v:
Advances in Compositional Data Analysis ISBN: 9783030711740
High-throughput sequencing datasets comprise millions of reads of genomic data and can be modelled as count compositions. These data are used for transcription profiles, microbial diversity, or relative cellular abundance in culture. The data are spa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::221b728232f058bdd27e2569cf0cae23
https://doi.org/10.1007/978-3-030-71175-7_17
https://doi.org/10.1007/978-3-030-71175-7_17