Zobrazeno 1 - 10
of 118
pro vyhledávání: '"Javier Arsuaga"'
Autor:
Georgina Gonzalez-Isunza, M. Zaki Jawaid, Pengyu Liu, Daniel L. Cox, Mariel Vazquez, Javier Arsuaga
Publikováno v:
Scientific Reports, Vol 13, Iss 1, Pp 1-12 (2023)
Abstract Establishing the host range for novel viruses remains a challenge. Here, we address the challenge of identifying non-human animal coronaviruses that may infect humans by creating an artificial neural network model that learns from spike prot
Externí odkaz:
https://doaj.org/article/b2c2e98ae64347ba969d848fbde6139e
Autor:
Huasheng Yu, Jingwei Xiong, Adam Yongxin Ye, Suna Li Cranfill, Tariq Cannonier, Mayank Gautam, Marina Zhang, Rayan Bilal, Jong-Eun Park, Yuji Xue, Vidhur Polam, Zora Vujovic, Daniel Dai, William Ong, Jasper Ip, Amanda Hsieh, Nour Mimouni, Alejandra Lozada, Medhini Sosale, Alex Ahn, Minghong Ma, Long Ding, Javier Arsuaga, Wenqin Luo
Publikováno v:
eLife, Vol 11 (2022)
Mice are the most commonly used model animals for itch research and for development of anti-itch drugs. Most laboratories manually quantify mouse scratching behavior to assess itch intensity. This process is labor-intensive and limits large-scale gen
Externí odkaz:
https://doaj.org/article/11ae15c2fe5f471485516da0796ed2ab
Publikováno v:
Entropy, Vol 24, Iss 7, p 896 (2022)
Copy number changes play an important role in the development of cancer and are commonly associated with changes in gene expression. Persistence curves, such as Betti curves, have been used to detect copy number changes; however, it is known these cu
Externí odkaz:
https://doaj.org/article/f6cc67d16df24f958952a0e5dcb5d569
Autor:
Georgina Gonzalez-Isunza, Muhammad Jawaid, Pengyu Liu, Daniel Cox, Mariel Vazquez, Javier Arsuaga
Publikováno v:
Scientific reports, vol 13, iss 1
Establishing the host range for novel viruses remains a challenge. Here, we address the challenge of identifying non-human animal coronaviruses that may infect humans by creating an artificial neural network model that learns from spike protein seque
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b1499530af1e930408511179b82f0b14
https://doi.org/10.1101/2022.12.11.520008
https://doi.org/10.1101/2022.12.11.520008
Autor:
Jingwei Xiong, Huasheng Yu, Adam Yongxin Ye, Suna Li Cranfill, Tariq Cannonier, Mayank Gautam, Marina Zhang, Rayan Bilal, Jong-Eun Park, Yuji Xue, Vidhur Polam, Zora Vujovic, Daniel Dai, William Ong, Jasper Ip, Amanda Hsieh, Nour Mimouni, Alejandra Lozada, Medhini Sosale, Alex Ahn, Minghong Ma, Long Ding, Javier Arsuaga, Wenqin Luo
Publikováno v:
eLife. 11
Mice are the most commonly used model animals for itch research and for development of antiitch drugs. Most labs manually quantify mouse scratching behavior to assess itch intensity. This process is labor-intensive and limits large-scale genetic or d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::03ef7afe6062c38b009e2f4b42bae49e
https://doi.org/10.7554/elife.84042
https://doi.org/10.7554/elife.84042
Autor:
Jingwei Xiong, Huasheng Yu, Adam Yongxin Ye, Suna Li Cranfill, Tariq Cannonier, Mayank Gautam, Marina Zhang, Rayan Bilal, Jong-Eun Park, Yuji Xue, Vidhur Polam, Zora Vujovic, Daniel Dai, William Ong, Jasper Ip, Amanda Hsieh, Nour Mimouni, Alejandra Lozada, Medhini Sosale, Alex Ahn, Minghong Ma, Long Ding, Javier Arsuaga, Wenqin Luo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::07722d48b0d4356a4ae8be7516cc04ea
https://doi.org/10.7554/elife.84042.sa2
https://doi.org/10.7554/elife.84042.sa2
Publikováno v:
Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 478
We study equilibrium configurations of double-stranded DNA in a cylindrical viral capsid. The state of the encapsidated DNA consists of a disordered inner core enclosed by an ordered outer region, next to the capsid wall. The DNA configuration is des
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c698001048d2a52ed5f7425071cb481c
https://doi.org/10.1098/rspa.2022.0047
https://doi.org/10.1098/rspa.2022.0047
Publikováno v:
Biophysical Journal
Biophysical journal, vol 118, iss 9
Biophysical journal, vol 118, iss 9
Molecular motors that translocate DNA are ubiquitous in nature. During morphogenesis of double-stranded DNA bacteriophages, a molecular motor drives the viral genome inside a protein capsid. Several models have been proposed for the three-dimensional
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::51cf40ee623c13f6535ddcd11f4ff46b
http://europepmc.org/articles/PMC7203069
http://europepmc.org/articles/PMC7203069
Publikováno v:
Topology and Geometry of Biopolymers. :17-39
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8d7ca760ba308108f1cc37288b2df376
https://doi.org/10.1090/conm/746/15000
https://doi.org/10.1090/conm/746/15000
Publikováno v:
PLoS ONE, Vol 10, Iss 6, p e0130998 (2015)
Kinetoplast DNA (kDNA), a unique mitochondrial structure common to trypanosomatid parasites, contains thousands of DNA minicircles that are densely packed and can be topologically linked into a chain mail-like network. Experimental data indicate that
Externí odkaz:
https://doaj.org/article/cccf5db65f2e49fba8a11cc01fe5c911